Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YER138W-AYER138W-A 105 nt3.83□□□□□ -1.8
RPA49Q01080 GVP36YIL041W 981 nt3.83□□□□□ -1.8
RPA49Q01080 ARC19YKL013C 516 nt3.83□□□□□ -1.8
RPA49Q01080 HYM1YKL189W 1200 nt3.83□□□□□ -1.8
RPA49Q01080 YPT7YML001W 627 nt3.83□□□□□ -1.8
RPA49Q01080 ATG19YOL082W 1248 nt3.83□□□□□ -1.8
RPA49Q01080 YBL107W-AYBL107W-A 105 nt3.83□□□□□ -1.8
RPA49Q01080 MRPL51YPR100W 423 nt3.83□□□□□ -1.8
RPA49Q01080 DER1YBR201W 636 nt3.83□□□□□ -1.8
RPA49Q01080 CHD1YER164W 4407 nt3.83□□□□□ -1.8
RPA49Q01080 AVT7YIL088C 1473 nt3.83□□□□□ -1.8
RPA49Q01080 UBX5YDR330W 1503 nt3.83□□□□□ -1.8
RPA49Q01080 MIC60YKR016W 1623 nt3.83□□□□□ -1.8
RPA49Q01080 CTM1YHR109W 1758 nt3.83□□□□□ -1.8
RPA49Q01080 MSD1YPL104W 1977 nt3.83□□□□□ -1.8
RPA49Q01080 APE2YKL157W 2859 nt3.83□□□□□ -1.8
RPA49Q01080 TRS120YDR407C 3870 nt3.83□□□□□ -1.8
RPA49Q01080 RPO31YOR116C 4383 nt3.82□□□□□ -1.8
RPA49Q01080 CUE3YGL110C 1875 nt3.82□□□□□ -1.8
RPA49Q01080 PLM2YDR501W 1566 nt3.82□□□□□ -1.8
RPA49Q01080 SEC59YMR013C 1560 nt3.82□□□□□ -1.8
RPA49Q01080 TRX3YCR083W 384 nt3.82□□□□□ -1.8
RPA49Q01080 BSC1YDL037C 987 nt3.82□□□□□ -1.8
RPA49Q01080 PRP11YDL043C 801 nt3.82□□□□□ -1.8
RPA49Q01080 YGR161W-CYGR161W-C 279 nt3.82□□□□□ -1.8
RPA49Q01080 PET130YJL023C 1044 nt3.82□□□□□ -1.8
RPA49Q01080 HOT13YKL084W 351 nt3.82□□□□□ -1.8
RPA49Q01080 YNL035CYNL035C 1170 nt3.82□□□□□ -1.8
RPA49Q01080 RRN6YBL014C 2685 nt3.82□□□□□ -1.8
RPA49Q01080 FUN12YAL035W 3009 nt3.81□□□□□ -1.8
RPA49Q01080 FCF1YDR339C 570 nt3.81□□□□□ -1.8
RPA49Q01080 YGL074CYGL074C 327 nt3.81□□□□□ -1.8
RPA49Q01080 GAB1YLR459W 1185 nt3.81□□□□□ -1.8
RPA49Q01080 YIP3YNL044W 531 nt3.81□□□□□ -1.8
RPA49Q01080 COS1YNL336W 1146 nt3.81□□□□□ -1.8
RPA49Q01080 YBR103C-AYBR103C-A 144 nt3.81□□□□□ -1.8
RPA49Q01080 ELM1YKL048C 1923 nt3.81□□□□□ -1.8
RPA49Q01080 SEG1YMR086W 2883 nt3.81□□□□□ -1.8
RPA49Q01080 CIT1YNR001C 1440 nt3.8□□□□□ -1.8
RPA49Q01080 YCR016WYCR016W 873 nt3.8□□□□□ -1.8
RPA49Q01080 NHP10YDL002C 612 nt3.8□□□□□ -1.8
RPA49Q01080 snR78snR78 87 nt3.8□□□□□ -1.8
RPA49Q01080 YDR355CYDR355C 303 nt3.8□□□□□ -1.8
RPA49Q01080 SDS3YIL084C 984 nt3.8□□□□□ -1.8
RPA49Q01080 MRPL49YJL096W 486 nt3.8□□□□□ -1.8
RPA49Q01080 CSH1YBR161W 1131 nt3.8□□□□□ -1.8
RPA49Q01080 MCD4YKL165C 2760 nt3.8□□□□□ -1.8
RPA49Q01080 DBP3YGL078C 1572 nt3.8□□□□□ -1.8
RPA49Q01080 KIP3YGL216W 2418 nt3.8□□□□□ -1.8
RPA49Q01080 YPL109CYPL109C 1974 nt3.8□□□□□ -1.8
RPA49Q01080 TEC1YBR083W 1461 nt3.79□□□□□ -1.8
RPA49Q01080 YGR117CYGR117C 1431 nt3.79□□□□□ -1.8
RPA49Q01080 KAR1YNL188W 1302 nt3.79□□□□□ -1.8
RPA49Q01080 RPS18AYDR450W 441 nt3.79□□□□□ -1.8
RPA49Q01080 YMR310CYMR310C 954 nt3.79□□□□□ -1.8
RPA49Q01080 RPL18AYOL120C 561 nt3.79□□□□□ -1.8
RPA49Q01080 PFK27YOL136C 1194 nt3.79□□□□□ -1.8
RPA49Q01080 IDH2YOR136W 1110 nt3.79□□□□□ -1.8
RPA49Q01080 SYC1YOR179C 567 nt3.79□□□□□ -1.8
RPA49Q01080 YBR089WYBR089W 600 nt3.79□□□□□ -1.8
RPA49Q01080 ACK1YDL203C 1872 nt3.79□□□□□ -1.8
RPA49Q01080 JEN1YKL217W 1851 nt3.79□□□□□ -1.8
RPA49Q01080 BUD27YFL023W 2391 nt3.78□□□□□ -1.8
RPA49Q01080 CET1YPL228W 1650 nt3.78□□□□□ -1.8
RPA49Q01080 GCN5YGR252W 1320 nt3.78□□□□□ -1.8
RPA49Q01080 YGL006W-AYGL006W-A 111 nt3.78□□□□□ -1.8
RPA49Q01080 AIM26YKL037W 357 nt3.78□□□□□ -1.8
RPA49Q01080 YOL038C-AYOL038C-A 96 nt3.78□□□□□ -1.8
RPA49Q01080 TDA1YMR291W 1761 nt3.78□□□□□ -1.8
RPA49Q01080 LRG1YDL240W 3054 nt3.78□□□□□ -1.8
RPA49Q01080 RAD2YGR258C 3096 nt3.78□□□□□ -1.8
RPA49Q01080 NRP1YDL167C 2160 nt3.78□□□□□ -1.81
RPA49Q01080 YJR061WYJR061W 2808 nt3.77□□□□□ -1.81
RPA49Q01080 TAF7YMR227C 1773 nt3.77□□□□□ -1.81
RPA49Q01080 RRN7YJL025W 1545 nt3.77□□□□□ -1.81
RPA49Q01080 CAF130YGR134W 3369 nt3.77□□□□□ -1.81
RPA49Q01080 IRC9YJL142C 393 nt3.77□□□□□ -1.81
RPA49Q01080 YKL162CYKL162C 1209 nt3.77□□□□□ -1.81
RPA49Q01080 AHP1YLR109W 531 nt3.77□□□□□ -1.81
RPA49Q01080 RIF2YLR453C 1188 nt3.77□□□□□ -1.81
RPA49Q01080 ARG80YMR042W 534 nt3.77□□□□□ -1.81
RPA49Q01080 MOH1YBL049W 417 nt3.77□□□□□ -1.81
RPA49Q01080 SIL1YOL031C 1266 nt3.77□□□□□ -1.81
RPA49Q01080 SUR1YPL057C 1149 nt3.77□□□□□ -1.81
RPA49Q01080 PRM15YMR278W 1869 nt3.77□□□□□ -1.81
RPA49Q01080 SPT6YGR116W 4356 nt3.77□□□□□ -1.81
RPA49Q01080 TSR1YDL060W 2367 nt3.76□□□□□ -1.81
RPA49Q01080 KIN3YAR018C 1308 nt3.76□□□□□ -1.81
RPA49Q01080 YPR148CYPR148C 1308 nt3.76□□□□□ -1.81
RPA49Q01080 YOL019WYOL019W 1656 nt3.76□□□□□ -1.81
RPA49Q01080 IZH1YDR492W 951 nt3.76□□□□□ -1.81
RPA49Q01080 WBP1YEL002C 1293 nt3.76□□□□□ -1.81
RPA49Q01080 AIR1YIL079C 1083 nt3.76□□□□□ -1.81
RPA49Q01080 ATG34YOL083W 1239 nt3.76□□□□□ -1.81
RPA49Q01080 YBR137WYBR137W 540 nt3.76□□□□□ -1.81
RPA49Q01080 ISM1YPL040C 3009 nt3.76□□□□□ -1.81
RPA49Q01080 MNL1YHR204W 2391 nt3.76□□□□□ -1.81
RPA49Q01080 VID27YNL212W 2349 nt3.76□□□□□ -1.81
RPA49Q01080 GYP6YJL044C 1377 nt3.76□□□□□ -1.81
RPA49Q01080 APL4YPR029C 2499 nt3.76□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms