Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
H3F3AP84243 EP400NL-214ENST00000641289 2402 ntBASIC19.27■□□□□ 0.68
H3F3AP84243 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3F3AP84243 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
H3F3AP84243 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.27■□□□□ 0.68
H3F3AP84243 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3F3AP84243 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
H3F3AP84243 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.27■□□□□ 0.68
H3F3AP84243 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.27■□□□□ 0.68
H3F3AP84243 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
H3F3AP84243 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.27■□□□□ 0.68
H3F3AP84243 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.27■□□□□ 0.68
H3F3AP84243 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.27■□□□□ 0.68
H3F3AP84243 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.27■□□□□ 0.68
H3F3AP84243 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.27■□□□□ 0.68
H3F3AP84243 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3F3AP84243 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3F3AP84243 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
H3F3AP84243 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H3F3AP84243 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
H3F3AP84243 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.27■□□□□ 0.67
H3F3AP84243 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
H3F3AP84243 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
H3F3AP84243 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.26■□□□□ 0.67
H3F3AP84243 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.26■□□□□ 0.67
H3F3AP84243 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.26■□□□□ 0.67
H3F3AP84243 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
H3F3AP84243 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.26■□□□□ 0.67
H3F3AP84243 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.26■□□□□ 0.67
H3F3AP84243 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.25■□□□□ 0.67
H3F3AP84243 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.25■□□□□ 0.67
H3F3AP84243 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.25■□□□□ 0.67
H3F3AP84243 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.25■□□□□ 0.67
H3F3AP84243 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.25■□□□□ 0.67
H3F3AP84243 AL034346.1-201ENST00000568244 1277 ntBASIC19.25■□□□□ 0.67
H3F3AP84243 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.25■□□□□ 0.67
H3F3AP84243 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 BX005040.4-201ENST00000637145 1518 ntBASIC19.25■□□□□ 0.67
H3F3AP84243 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
H3F3AP84243 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
H3F3AP84243 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 AP004607.7-201ENST00000527152 1677 ntBASIC19.24■□□□□ 0.67
H3F3AP84243 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.24■□□□□ 0.67
H3F3AP84243 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.24■□□□□ 0.67
H3F3AP84243 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.24■□□□□ 0.67
H3F3AP84243 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
H3F3AP84243 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
H3F3AP84243 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
H3F3AP84243 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
H3F3AP84243 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3AP84243 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3AP84243 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.23■□□□□ 0.67
H3F3AP84243 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.23■□□□□ 0.67
H3F3AP84243 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.23■□□□□ 0.67
H3F3AP84243 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.23■□□□□ 0.67
H3F3AP84243 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.23■□□□□ 0.67
H3F3AP84243 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.23■□□□□ 0.67
H3F3AP84243 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.23■□□□□ 0.67
H3F3AP84243 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3AP84243 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3AP84243 AC019069.1-201ENST00000610008 1333 ntBASIC19.23■□□□□ 0.67
H3F3AP84243 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3AP84243 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
H3F3AP84243 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3AP84243 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3AP84243 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.22■□□□□ 0.67
H3F3AP84243 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3AP84243 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.22■□□□□ 0.67
H3F3AP84243 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.22■□□□□ 0.67
H3F3AP84243 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.22■□□□□ 0.67
H3F3AP84243 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms