Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CDC42P60953 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.64■□□□□ 0.74
CDC42P60953 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.64■□□□□ 0.74
CDC42P60953 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CDC42P60953 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 AC010980.1-201ENST00000587192 1142 ntBASIC19.64■□□□□ 0.73
CDC42P60953 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CDC42P60953 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CDC42P60953 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CDC42P60953 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDC42P60953 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDC42P60953 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.63■□□□□ 0.73
CDC42P60953 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.63■□□□□ 0.73
CDC42P60953 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDC42P60953 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CDC42P60953 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDC42P60953 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42P60953 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42P60953 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDC42P60953 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42P60953 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42P60953 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CDC42P60953 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42P60953 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42P60953 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42P60953 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42P60953 MIR4508-201ENST00000584178 70 ntBASIC19.62■□□□□ 0.73
CDC42P60953 LINC01521-201ENST00000504184 1943 ntBASIC19.62■□□□□ 0.73
CDC42P60953 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42P60953 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42P60953 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDC42P60953 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.62■□□□□ 0.73
CDC42P60953 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.62■□□□□ 0.73
CDC42P60953 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.61■□□□□ 0.73
CDC42P60953 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42P60953 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42P60953 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42P60953 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.61■□□□□ 0.73
CDC42P60953 ATP5G2P3-201ENST00000429083 425 ntBASIC19.61■□□□□ 0.73
CDC42P60953 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
CDC42P60953 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDC42P60953 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDC42P60953 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42P60953 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42P60953 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
CDC42P60953 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42P60953 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42P60953 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42P60953 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42P60953 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
CDC42P60953 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDC42P60953 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42P60953 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.6■□□□□ 0.73
CDC42P60953 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.6■□□□□ 0.73
CDC42P60953 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42P60953 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDC42P60953 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDC42P60953 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42P60953 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42P60953 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42P60953 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42P60953 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.59■□□□□ 0.73
CDC42P60953 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDC42P60953 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CDC42P60953 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms