Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.93■□□□□ 0.94
PDX1P52945 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDX1P52945 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.92■□□□□ 0.94
PDX1P52945 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.92■□□□□ 0.94
PDX1P52945 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.92■□□□□ 0.94
PDX1P52945 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.92■□□□□ 0.94
PDX1P52945 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.92■□□□□ 0.94
PDX1P52945 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.92■□□□□ 0.94
PDX1P52945 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDX1P52945 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDX1P52945 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
PDX1P52945 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDX1P52945 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PDX1P52945 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PDX1P52945 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDX1P52945 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.91■□□□□ 0.94
PDX1P52945 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PDX1P52945 AC006970.2-201ENST00000450065 779 ntBASIC20.91■□□□□ 0.94
PDX1P52945 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.91■□□□□ 0.94
PDX1P52945 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.91■□□□□ 0.94
PDX1P52945 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.91■□□□□ 0.94
PDX1P52945 AC012676.1-201ENST00000574705 1949 ntBASIC20.91■□□□□ 0.94
PDX1P52945 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDX1P52945 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDX1P52945 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.9■□□□□ 0.94
PDX1P52945 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDX1P52945 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.9■□□□□ 0.94
PDX1P52945 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.9■□□□□ 0.94
PDX1P52945 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDX1P52945 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.9■□□□□ 0.94
PDX1P52945 AC079140.4-201ENST00000507448 529 ntBASIC20.9■□□□□ 0.94
PDX1P52945 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.9■□□□□ 0.94
PDX1P52945 AC011767.1-201ENST00000617410 1153 ntBASIC20.9■□□□□ 0.94
PDX1P52945 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PDX1P52945 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PDX1P52945 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDX1P52945 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.9■□□□□ 0.94
PDX1P52945 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.9■□□□□ 0.94
PDX1P52945 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDX1P52945 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.9■□□□□ 0.94
PDX1P52945 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDX1P52945 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
PDX1P52945 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDX1P52945 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.89■□□□□ 0.94
PDX1P52945 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.89■□□□□ 0.94
PDX1P52945 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PDX1P52945 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.89■□□□□ 0.94
PDX1P52945 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDX1P52945 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDX1P52945 MIR663A-201ENST00000385250 93 ntBASIC20.89■□□□□ 0.93
PDX1P52945 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
PDX1P52945 ESRRAP2-201ENST00000418437 1549 ntBASIC20.88■□□□□ 0.93
PDX1P52945 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.88■□□□□ 0.93
PDX1P52945 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.88■□□□□ 0.93
PDX1P52945 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 NCF1B-203ENST00000435988 1254 ntBASIC20.88■□□□□ 0.93
PDX1P52945 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.88■□□□□ 0.93
PDX1P52945 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PDX1P52945 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDX1P52945 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.87■□□□□ 0.93
PDX1P52945 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.87■□□□□ 0.93
PDX1P52945 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.87■□□□□ 0.93
PDX1P52945 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.87■□□□□ 0.93
PDX1P52945 AL355802.2-201ENST00000402069 882 ntBASIC20.87■□□□□ 0.93
PDX1P52945 KRT18P11-201ENST00000435214 1283 ntBASIC20.87■□□□□ 0.93
PDX1P52945 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.87■□□□□ 0.93
PDX1P52945 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.87■□□□□ 0.93
PDX1P52945 AL109923.1-201ENST00000618799 583 ntBASIC20.87■□□□□ 0.93
PDX1P52945 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PDX1P52945 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDX1P52945 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PDX1P52945 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.86■□□□□ 0.93
PDX1P52945 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDX1P52945 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.86■□□□□ 0.93
PDX1P52945 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms