Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC1P51610 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.89■□□□□ 0.61
HCFC1P51610 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC1P51610 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.89■□□□□ 0.61
HCFC1P51610 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.89■□□□□ 0.61
HCFC1P51610 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCFC1P51610 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.88■□□□□ 0.61
HCFC1P51610 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC1P51610 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC1P51610 OXCT2P1-201ENST00000447263 1535 ntBASIC18.88■□□□□ 0.61
HCFC1P51610 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC1P51610 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC1P51610 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC1P51610 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC1P51610 AC073210.2-201ENST00000430369 194 ntBASIC18.88■□□□□ 0.61
HCFC1P51610 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC1P51610 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.87■□□□□ 0.61
HCFC1P51610 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC1P51610 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC1P51610 AC005181.1-201ENST00000604782 1256 ntBASIC18.87■□□□□ 0.61
HCFC1P51610 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC1P51610 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
HCFC1P51610 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC1P51610 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HCFC1P51610 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.86■□□□□ 0.61
HCFC1P51610 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HCFC1P51610 AC138907.5-202ENST00000569484 235 ntBASIC18.86■□□□□ 0.61
HCFC1P51610 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.86■□□□□ 0.61
HCFC1P51610 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
HCFC1P51610 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC1P51610 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC1P51610 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC1P51610 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC1P51610 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC1P51610 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HCFC1P51610 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC1P51610 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HCFC1P51610 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC1P51610 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HCFC1P51610 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HCFC1P51610 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC1P51610 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HCFC1P51610 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC1P51610 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
HCFC1P51610 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC1P51610 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.85■□□□□ 0.61
HCFC1P51610 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.85■□□□□ 0.61
HCFC1P51610 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC1P51610 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC1P51610 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC1P51610 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HCFC1P51610 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.84■□□□□ 0.61
HCFC1P51610 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.84■□□□□ 0.61
HCFC1P51610 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.84■□□□□ 0.61
HCFC1P51610 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.84■□□□□ 0.61
HCFC1P51610 LINC01960-201ENST00000563759 1884 ntBASIC18.84■□□□□ 0.61
HCFC1P51610 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
HCFC1P51610 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.84■□□□□ 0.61
HCFC1P51610 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HCFC1P51610 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.84■□□□□ 0.61
HCFC1P51610 AC133552.2-202ENST00000575694 574 ntBASIC18.84■□□□□ 0.61
HCFC1P51610 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.84■□□□□ 0.61
HCFC1P51610 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.84■□□□□ 0.61
HCFC1P51610 AC013268.1-206ENST00000638368 961 ntBASIC18.84■□□□□ 0.61
HCFC1P51610 AC112229.1-201ENST00000639295 961 ntBASIC18.84■□□□□ 0.61
HCFC1P51610 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
HCFC1P51610 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.84■□□□□ 0.61
HCFC1P51610 DUSP8P5-201ENST00000422884 1815 ntBASIC18.84■□□□□ 0.61
HCFC1P51610 AC055733.4-201ENST00000638462 1354 ntBASIC18.83■□□□□ 0.61
HCFC1P51610 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HCFC1P51610 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.83■□□□□ 0.61
HCFC1P51610 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.83■□□□□ 0.61
HCFC1P51610 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HCFC1P51610 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.83■□□□□ 0.61
HCFC1P51610 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HCFC1P51610 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
HCFC1P51610 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCFC1P51610 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HCFC1P51610 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HCFC1P51610 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HCFC1P51610 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HCFC1P51610 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms