Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF144AP50876 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF144AP50876 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF144AP50876 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF144AP50876 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF144AP50876 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF144AP50876 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.97■□□□□ 0.79
RNF144AP50876 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF144AP50876 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RNF144AP50876 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF144AP50876 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF144AP50876 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF144AP50876 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF144AP50876 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF144AP50876 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF144AP50876 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF144AP50876 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF144AP50876 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF144AP50876 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.95■□□□□ 0.78
RNF144AP50876 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF144AP50876 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF144AP50876 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.95■□□□□ 0.78
RNF144AP50876 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.95■□□□□ 0.78
RNF144AP50876 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF144AP50876 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF144AP50876 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF144AP50876 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF144AP50876 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF144AP50876 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RNF144AP50876 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF144AP50876 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF144AP50876 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF144AP50876 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF144AP50876 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF144AP50876 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.94■□□□□ 0.78
RNF144AP50876 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF144AP50876 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF144AP50876 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF144AP50876 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF144AP50876 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RNF144AP50876 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF144AP50876 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RNF144AP50876 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF144AP50876 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF144AP50876 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF144AP50876 AC007375.3-201ENST00000600936 2314 ntBASIC19.93■□□□□ 0.78
RNF144AP50876 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF144AP50876 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF144AP50876 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF144AP50876 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF144AP50876 AC026471.6-201ENST00000622954 1905 ntBASIC19.92■□□□□ 0.78
RNF144AP50876 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF144AP50876 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RNF144AP50876 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF144AP50876 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF144AP50876 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF144AP50876 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF144AP50876 AC079089.2-201ENST00000531211 1277 ntBASIC19.92■□□□□ 0.78
RNF144AP50876 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
RNF144AP50876 AC106739.1-201ENST00000617035 715 ntBASIC19.92■□□□□ 0.78
RNF144AP50876 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF144AP50876 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNF144AP50876 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF144AP50876 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
RNF144AP50876 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF144AP50876 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF144AP50876 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF144AP50876 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF144AP50876 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF144AP50876 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF144AP50876 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF144AP50876 AC099791.1-201ENST00000416440 715 ntBASIC19.91■□□□□ 0.78
RNF144AP50876 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RNF144AP50876 AC010141.3-201ENST00000456659 717 ntBASIC19.91■□□□□ 0.78
RNF144AP50876 AC126544.1-201ENST00000580842 1059 ntBASIC19.91■□□□□ 0.78
RNF144AP50876 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF144AP50876 FAM99A-202ENST00000538190 1989 ntBASIC19.91■□□□□ 0.78
RNF144AP50876 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF144AP50876 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF144AP50876 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF144AP50876 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF144AP50876 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF144AP50876 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF144AP50876 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF144AP50876 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF144AP50876 AF213884.3-201ENST00000563833 479 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms