Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 MIR3181-201ENST00000578512 73 ntBASIC20.32■□□□□ 0.84
CLK3P49761 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CLK3P49761 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.32■□□□□ 0.84
CLK3P49761 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CLK3P49761 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLK3P49761 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLK3P49761 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK3P49761 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK3P49761 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK3P49761 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.31■□□□□ 0.84
CLK3P49761 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.31■□□□□ 0.84
CLK3P49761 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK3P49761 UNC93B3-201ENST00000308076 687 ntBASIC20.31■□□□□ 0.84
CLK3P49761 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK3P49761 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK3P49761 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CLK3P49761 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.31■□□□□ 0.84
CLK3P49761 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CLK3P49761 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLK3P49761 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLK3P49761 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.31■□□□□ 0.84
CLK3P49761 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CLK3P49761 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLK3P49761 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
CLK3P49761 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.31■□□□□ 0.84
CLK3P49761 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK3P49761 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK3P49761 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.3■□□□□ 0.84
CLK3P49761 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CLK3P49761 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CLK3P49761 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLK3P49761 SERBP1P1-201ENST00000396021 1160 ntBASIC20.3■□□□□ 0.84
CLK3P49761 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.3■□□□□ 0.84
CLK3P49761 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.3■□□□□ 0.84
CLK3P49761 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLK3P49761 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.3■□□□□ 0.84
CLK3P49761 AC011298.3-201ENST00000615796 283 ntBASIC20.3■□□□□ 0.84
CLK3P49761 AC133637.1-201ENST00000624115 1537 ntBASIC20.3■□□□□ 0.84
CLK3P49761 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.3■□□□□ 0.84
CLK3P49761 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.3■□□□□ 0.84
CLK3P49761 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK3P49761 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.3■□□□□ 0.84
CLK3P49761 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CLK3P49761 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLK3P49761 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
CLK3P49761 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.29■□□□□ 0.84
CLK3P49761 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CLK3P49761 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.29■□□□□ 0.84
CLK3P49761 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.29■□□□□ 0.84
CLK3P49761 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLK3P49761 FAM99A-202ENST00000538190 1989 ntBASIC20.28■□□□□ 0.84
CLK3P49761 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CLK3P49761 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK3P49761 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK3P49761 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLK3P49761 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLK3P49761 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.28■□□□□ 0.84
CLK3P49761 AC096631.2-201ENST00000436136 790 ntBASIC20.28■□□□□ 0.84
CLK3P49761 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.28■□□□□ 0.84
CLK3P49761 AL136162.1-201ENST00000607711 1078 ntBASIC20.28■□□□□ 0.84
CLK3P49761 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.28■□□□□ 0.84
CLK3P49761 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK3P49761 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK3P49761 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLK3P49761 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLK3P49761 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLK3P49761 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.28■□□□□ 0.84
CLK3P49761 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLK3P49761 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CLK3P49761 AC010542.4-201ENST00000563151 1910 ntBASIC20.27■□□□□ 0.84
CLK3P49761 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLK3P49761 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLK3P49761 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CLK3P49761 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
CLK3P49761 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CLK3P49761 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CLK3P49761 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLK3P49761 AC136469.2-201ENST00000623944 1028 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms