Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.96■□□□□ 0.31
CDC34P49427 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CDC34P49427 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CDC34P49427 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDC34P49427 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC34P49427 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC34P49427 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CDC34P49427 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDC34P49427 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.95■□□□□ 0.3
CDC34P49427 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CDC34P49427 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDC34P49427 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.95■□□□□ 0.3
CDC34P49427 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.95■□□□□ 0.3
CDC34P49427 FP325331.1-202ENST00000623531 1380 ntBASIC16.95■□□□□ 0.3
CDC34P49427 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.95■□□□□ 0.3
CDC34P49427 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.95■□□□□ 0.3
CDC34P49427 AC019171.1-201ENST00000601251 1056 ntBASIC16.95■□□□□ 0.3
CDC34P49427 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC34P49427 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC34P49427 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDC34P49427 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC34P49427 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDC34P49427 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
CDC34P49427 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CDC34P49427 MIR4281-201ENST00000580852 62 ntBASIC16.94■□□□□ 0.3
CDC34P49427 CA15P2-201ENST00000611168 834 ntBASIC16.94■□□□□ 0.3
CDC34P49427 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC34P49427 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.94■□□□□ 0.3
CDC34P49427 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.94■□□□□ 0.3
CDC34P49427 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC34P49427 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC34P49427 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.94■□□□□ 0.3
CDC34P49427 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDC34P49427 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC34P49427 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CDC34P49427 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.93■□□□□ 0.3
CDC34P49427 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDC34P49427 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDC34P49427 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.93■□□□□ 0.3
CDC34P49427 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 RNF126P1-201ENST00000567452 1320 ntBASIC16.93■□□□□ 0.3
CDC34P49427 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDC34P49427 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CDC34P49427 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.92■□□□□ 0.3
CDC34P49427 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.92■□□□□ 0.3
CDC34P49427 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDC34P49427 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.92■□□□□ 0.3
CDC34P49427 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.92■□□□□ 0.3
CDC34P49427 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.91■□□□□ 0.3
CDC34P49427 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC34P49427 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC34P49427 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.91■□□□□ 0.3
CDC34P49427 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDC34P49427 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDC34P49427 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.91■□□□□ 0.3
CDC34P49427 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDC34P49427 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms