Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2CP42773 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2CP42773 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKN2CP42773 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2CP42773 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKN2CP42773 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.36■□□□□ 0.85
CDKN2CP42773 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKN2CP42773 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDKN2CP42773 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKN2CP42773 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKN2CP42773 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDKN2CP42773 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2CP42773 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2CP42773 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKN2CP42773 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.36■□□□□ 0.85
CDKN2CP42773 AF106564.1-201ENST00000607058 2553 ntBASIC20.36■□□□□ 0.85
CDKN2CP42773 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CDKN2CP42773 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKN2CP42773 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2CP42773 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDKN2CP42773 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CDKN2CP42773 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2CP42773 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2CP42773 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CDKN2CP42773 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2CP42773 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKN2CP42773 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKN2CP42773 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDKN2CP42773 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.35■□□□□ 0.85
CDKN2CP42773 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKN2CP42773 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKN2CP42773 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKN2CP42773 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKN2CP42773 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKN2CP42773 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKN2CP42773 OR7E47P-201ENST00000546390 1422 ntBASIC20.34■□□□□ 0.85
CDKN2CP42773 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKN2CP42773 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKN2CP42773 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDKN2CP42773 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKN2CP42773 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKN2CP42773 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKN2CP42773 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.33■□□□□ 0.85
CDKN2CP42773 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.33■□□□□ 0.85
CDKN2CP42773 AL512631.2-201ENST00000604634 923 ntBASIC20.33■□□□□ 0.85
CDKN2CP42773 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDKN2CP42773 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDKN2CP42773 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDKN2CP42773 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDKN2CP42773 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.33■□□□□ 0.84
CDKN2CP42773 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CDKN2CP42773 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.32■□□□□ 0.84
CDKN2CP42773 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.32■□□□□ 0.84
CDKN2CP42773 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 OR2I1P-207ENST00000453522 948 ntBASIC20.32■□□□□ 0.84
CDKN2CP42773 AC010525.1-201ENST00000585559 441 ntBASIC20.32■□□□□ 0.84
CDKN2CP42773 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDKN2CP42773 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.32■□□□□ 0.84
CDKN2CP42773 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.32■□□□□ 0.84
CDKN2CP42773 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.32■□□□□ 0.84
CDKN2CP42773 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDKN2CP42773 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDKN2CP42773 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CDKN2CP42773 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.31■□□□□ 0.84
CDKN2CP42773 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKN2CP42773 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.31■□□□□ 0.84
CDKN2CP42773 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CDKN2CP42773 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.31■□□□□ 0.84
CDKN2CP42773 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKN2CP42773 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.31■□□□□ 0.84
CDKN2CP42773 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.31■□□□□ 0.84
CDKN2CP42773 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDKN2CP42773 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CDKN2CP42773 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
CDKN2CP42773 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
CDKN2CP42773 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKN2CP42773 FEM1AP4-201ENST00000443167 1987 ntBASIC20.3■□□□□ 0.84
CDKN2CP42773 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.3■□□□□ 0.84
CDKN2CP42773 SRD5A1P1-201ENST00000442297 786 ntBASIC20.3■□□□□ 0.84
CDKN2CP42773 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CDKN2CP42773 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.3■□□□□ 0.84
CDKN2CP42773 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDKN2CP42773 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDKN2CP42773 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms