Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 SIW14YNL032W 846 nt3.81□□□□□ -1.8
LSM5P40089 YOR082CYOR082C 342 nt3.81□□□□□ -1.8
LSM5P40089 snR17asnR17a 333 nt3.81□□□□□ -1.8
LSM5P40089 SIN4YNL236W 2925 nt3.81□□□□□ -1.8
LSM5P40089 YCF1YDR135C 4548 nt3.81□□□□□ -1.8
LSM5P40089 FRE4YNR060W 2160 nt3.8□□□□□ -1.8
LSM5P40089 MIP6YHR015W 1980 nt3.8□□□□□ -1.8
LSM5P40089 YNR065CYNR065C 3351 nt3.8□□□□□ -1.8
LSM5P40089 MAG1YER142C 891 nt3.8□□□□□ -1.8
LSM5P40089 YAR075WYAR075W 474 nt3.8□□□□□ -1.8
LSM5P40089 MRP2YPR166C 348 nt3.8□□□□□ -1.8
LSM5P40089 UBS1YBR165W 834 nt3.8□□□□□ -1.8
LSM5P40089 ECM22YLR228C 2445 nt3.8□□□□□ -1.8
LSM5P40089 TSC13YDL015C 933 nt3.79□□□□□ -1.8
LSM5P40089 RRP17YDR412W 708 nt3.79□□□□□ -1.8
LSM5P40089 KXD1YGL079W 657 nt3.79□□□□□ -1.8
LSM5P40089 SDS3YIL084C 984 nt3.79□□□□□ -1.8
LSM5P40089 GTT1YIR038C 705 nt3.79□□□□□ -1.8
LSM5P40089 YKL162CYKL162C 1209 nt3.79□□□□□ -1.8
LSM5P40089 FLD1YLR404W 858 nt3.79□□□□□ -1.8
LSM5P40089 RSF1YMR030W 1131 nt3.79□□□□□ -1.8
LSM5P40089 HUB1YNR032C-A 222 nt3.79□□□□□ -1.8
LSM5P40089 LDS2YOL047C 1071 nt3.79□□□□□ -1.8
LSM5P40089 FIG1YBR040W 897 nt3.79□□□□□ -1.8
LSM5P40089 ATG29YPL166W 642 nt3.79□□□□□ -1.8
LSM5P40089 PRP9YDL030W 1593 nt3.79□□□□□ -1.8
LSM5P40089 VMA1YDL185W 3216 nt3.79□□□□□ -1.8
LSM5P40089 SPT23YKL020C 3249 nt3.79□□□□□ -1.8
LSM5P40089 ALG8YOR067C 1734 nt3.78□□□□□ -1.8
LSM5P40089 LTV1YKL143W 1392 nt3.78□□□□□ -1.8
LSM5P40089 YBR225WYBR225W 2703 nt3.78□□□□□ -1.8
LSM5P40089 DBP3YGL078C 1572 nt3.78□□□□□ -1.8
LSM5P40089 RPS29BYDL061C 171 nt3.78□□□□□ -1.8
LSM5P40089 GCD14YJL125C 1152 nt3.78□□□□□ -1.8
LSM5P40089 ASI2YNL159C 870 nt3.78□□□□□ -1.8
LSM5P40089 DUG3YNL191W 1074 nt3.78□□□□□ -1.8
LSM5P40089 YPR078CYPR078C 1119 nt3.78□□□□□ -1.8
LSM5P40089 ROD1YOR018W 2514 nt3.78□□□□□ -1.8
LSM5P40089 SRP72YPL210C 1923 nt3.78□□□□□ -1.81
LSM5P40089 SSL1YLR005W 1386 nt3.77□□□□□ -1.81
LSM5P40089 GAL11YOL051W 3246 nt3.77□□□□□ -1.81
LSM5P40089 LRS4YDR439W 1044 nt3.77□□□□□ -1.81
LSM5P40089 CGR1YGL029W 363 nt3.77□□□□□ -1.81
LSM5P40089 YGL152CYGL152C 678 nt3.77□□□□□ -1.81
LSM5P40089 HOT13YKL084W 351 nt3.77□□□□□ -1.81
LSM5P40089 REH1YLR387C 1299 nt3.77□□□□□ -1.81
LSM5P40089 GAB1YLR459W 1185 nt3.77□□□□□ -1.81
LSM5P40089 RPC34YNR003C 954 nt3.77□□□□□ -1.81
LSM5P40089 FSH3YOR280C 801 nt3.77□□□□□ -1.81
LSM5P40089 YPL162CYPL162C 822 nt3.77□□□□□ -1.81
LSM5P40089 SRO7YPR032W 3102 nt3.77□□□□□ -1.81
LSM5P40089 AEP2YMR282C 1743 nt3.77□□□□□ -1.81
LSM5P40089 AIP1YMR092C 1848 nt3.77□□□□□ -1.81
LSM5P40089 TCB3YML072C 4638 nt3.76□□□□□ -1.81
LSM5P40089 ACE2YLR131C 2313 nt3.76□□□□□ -1.81
LSM5P40089 YCR085WYCR085W 354 nt3.76□□□□□ -1.81
LSM5P40089 QRI7YDL104C 1224 nt3.76□□□□□ -1.81
LSM5P40089 PMI40YER003C 1290 nt3.76□□□□□ -1.81
LSM5P40089 PTI1YGR156W 1278 nt3.76□□□□□ -1.81
LSM5P40089 YGR190CYGR190C 366 nt3.76□□□□□ -1.81
LSM5P40089 PDX1YGR193C 1233 nt3.76□□□□□ -1.81
LSM5P40089 EPT1YHR123W 1176 nt3.76□□□□□ -1.81
LSM5P40089 YIR023C-AYIR023C-A 324 nt3.76□□□□□ -1.81
LSM5P40089 ARG3YJL088W 1017 nt3.76□□□□□ -1.81
LSM5P40089 YJR111CYJR111C 852 nt3.76□□□□□ -1.81
LSM5P40089 PBA1YLR199C 831 nt3.76□□□□□ -1.81
LSM5P40089 RIF2YLR453C 1188 nt3.76□□□□□ -1.81
LSM5P40089 TRM112YNR046W 408 nt3.76□□□□□ -1.81
LSM5P40089 BUD27YFL023W 2391 nt3.76□□□□□ -1.81
LSM5P40089 USA1YML029W 2517 nt3.76□□□□□ -1.81
LSM5P40089 STP1YDR463W 1560 nt3.76□□□□□ -1.81
LSM5P40089 YPR003CYPR003C 2265 nt3.75□□□□□ -1.81
LSM5P40089 PPQ1YPL179W 1650 nt3.75□□□□□ -1.81
LSM5P40089 RAD55YDR076W 1221 nt3.75□□□□□ -1.81
LSM5P40089 DCG1YIR030C 735 nt3.75□□□□□ -1.81
LSM5P40089 YLR290CYLR290C 834 nt3.75□□□□□ -1.81
LSM5P40089 GLO1YML004C 981 nt3.75□□□□□ -1.81
LSM5P40089 YML090WYML090W 387 nt3.75□□□□□ -1.81
LSM5P40089 RLP7YNL002C 969 nt3.75□□□□□ -1.81
LSM5P40089 PRM4YPL156C 855 nt3.75□□□□□ -1.81
LSM5P40089 YDR089WYDR089W 2610 nt3.75□□□□□ -1.81
LSM5P40089 BAR1YIL015W 1764 nt3.75□□□□□ -1.81
LSM5P40089 SLI1YGR212W 1407 nt3.75□□□□□ -1.81
LSM5P40089 SST2YLR452C 2097 nt3.75□□□□□ -1.81
LSM5P40089 PWP2YCR057C 2772 nt3.74□□□□□ -1.81
LSM5P40089 HUL5YGL141W 2733 nt3.74□□□□□ -1.81
LSM5P40089 YDR124WYDR124W 975 nt3.74□□□□□ -1.81
LSM5P40089 SUP56tL(CAA)A 82 nt3.74□□□□□ -1.81
LSM5P40089 SUP53tL(CAA)C 82 nt3.74□□□□□ -1.81
LSM5P40089 tL(CAA)DtL(CAA)D 82 nt3.74□□□□□ -1.81
LSM5P40089 tL(CAA)G1tL(CAA)G1 82 nt3.74□□□□□ -1.81
LSM5P40089 SUP54tL(CAA)G2 82 nt3.74□□□□□ -1.81
LSM5P40089 tL(CAA)G3tL(CAA)G3 82 nt3.74□□□□□ -1.81
LSM5P40089 tL(CAA)KtL(CAA)K 82 nt3.74□□□□□ -1.81
LSM5P40089 tL(CAA)LtL(CAA)L 82 nt3.74□□□□□ -1.81
LSM5P40089 tL(CAA)MtL(CAA)M 82 nt3.74□□□□□ -1.81
LSM5P40089 tL(CAA)NtL(CAA)N 82 nt3.74□□□□□ -1.81
LSM5P40089 ARI1YGL157W 1044 nt3.74□□□□□ -1.81
LSM5P40089 PRP18YGR006W 756 nt3.74□□□□□ -1.81
LSM5P40089 RPS0AYGR214W 759 nt3.74□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 22.1 ms