Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC104564.3-201ENST00000582367 638 ntBASIC20.7■□□□□ 0.9
CAPN3P20807 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN3P20807 AC010997.5-201ENST00000609182 354 ntBASIC20.7■□□□□ 0.9
CAPN3P20807 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN3P20807 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CAPN3P20807 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CAPN3P20807 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CAPN3P20807 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CAPN3P20807 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CAPN3P20807 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CAPN3P20807 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CAPN3P20807 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CAPN3P20807 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN3P20807 AF106564.1-201ENST00000607058 2553 ntBASIC20.69■□□□□ 0.9
CAPN3P20807 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN3P20807 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN3P20807 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN3P20807 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
CAPN3P20807 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CAPN3P20807 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN3P20807 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPN3P20807 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CAPN3P20807 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.68■□□□□ 0.9
CAPN3P20807 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN3P20807 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN3P20807 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN3P20807 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN3P20807 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
CAPN3P20807 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN3P20807 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.68■□□□□ 0.9
CAPN3P20807 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CAPN3P20807 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CAPN3P20807 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.67■□□□□ 0.9
CAPN3P20807 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN3P20807 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN3P20807 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CAPN3P20807 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CAPN3P20807 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CAPN3P20807 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.67■□□□□ 0.9
CAPN3P20807 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPN3P20807 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.66■□□□□ 0.9
CAPN3P20807 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CAPN3P20807 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CAPN3P20807 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN3P20807 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN3P20807 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN3P20807 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CAPN3P20807 FEM1AP4-201ENST00000443167 1987 ntBASIC20.65■□□□□ 0.9
CAPN3P20807 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN3P20807 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CAPN3P20807 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN3P20807 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CAPN3P20807 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN3P20807 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.65■□□□□ 0.9
CAPN3P20807 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.65■□□□□ 0.9
CAPN3P20807 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN3P20807 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.65■□□□□ 0.9
CAPN3P20807 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPN3P20807 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CAPN3P20807 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CAPN3P20807 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPN3P20807 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.65■□□□□ 0.9
CAPN3P20807 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN3P20807 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN3P20807 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN3P20807 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN3P20807 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CAPN3P20807 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CAPN3P20807 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN3P20807 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.64■□□□□ 0.89
CAPN3P20807 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.64■□□□□ 0.89
CAPN3P20807 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.64■□□□□ 0.89
CAPN3P20807 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 MTDHP2-201ENST00000601468 714 ntBASIC20.64■□□□□ 0.89
CAPN3P20807 AL499627.2-201ENST00000606283 725 ntBASIC20.64■□□□□ 0.89
CAPN3P20807 MIR5787-201ENST00000611784 55 ntBASIC20.64■□□□□ 0.89
CAPN3P20807 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CAPN3P20807 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms