Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.34■□□□□ 0.85
NCK1P16333 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCK1P16333 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.33■□□□□ 0.85
NCK1P16333 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCK1P16333 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NCK1P16333 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCK1P16333 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCK1P16333 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NCK1P16333 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NCK1P16333 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCK1P16333 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.33■□□□□ 0.84
NCK1P16333 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.33■□□□□ 0.84
NCK1P16333 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NCK1P16333 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.33■□□□□ 0.84
NCK1P16333 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
NCK1P16333 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NCK1P16333 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCK1P16333 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NCK1P16333 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.32■□□□□ 0.84
NCK1P16333 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NCK1P16333 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.32■□□□□ 0.84
NCK1P16333 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCK1P16333 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.32■□□□□ 0.84
NCK1P16333 YBX1P4-201ENST00000392794 808 ntBASIC20.32■□□□□ 0.84
NCK1P16333 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.32■□□□□ 0.84
NCK1P16333 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NCK1P16333 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
NCK1P16333 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.32■□□□□ 0.84
NCK1P16333 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NCK1P16333 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.31■□□□□ 0.84
NCK1P16333 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
NCK1P16333 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
NCK1P16333 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NCK1P16333 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.31■□□□□ 0.84
NCK1P16333 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
NCK1P16333 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.31■□□□□ 0.84
NCK1P16333 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NCK1P16333 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.3■□□□□ 0.84
NCK1P16333 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NCK1P16333 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.29■□□□□ 0.84
NCK1P16333 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NCK1P16333 AL033527.3-201ENST00000566366 1196 ntBASIC20.29■□□□□ 0.84
NCK1P16333 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.29■□□□□ 0.84
NCK1P16333 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 AC021242.3-201ENST00000607598 1377 ntBASIC20.29■□□□□ 0.84
NCK1P16333 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
NCK1P16333 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.29■□□□□ 0.84
NCK1P16333 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
NCK1P16333 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCK1P16333 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.28■□□□□ 0.84
NCK1P16333 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NCK1P16333 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCK1P16333 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCK1P16333 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.28■□□□□ 0.84
NCK1P16333 AL031848.2-201ENST00000607670 837 ntBASIC20.28■□□□□ 0.84
NCK1P16333 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.28■□□□□ 0.84
NCK1P16333 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCK1P16333 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
NCK1P16333 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
NCK1P16333 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCK1P16333 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.27■□□□□ 0.84
NCK1P16333 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
NCK1P16333 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCK1P16333 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.27■□□□□ 0.84
NCK1P16333 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCK1P16333 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
NCK1P16333 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.27■□□□□ 0.84
NCK1P16333 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NCK1P16333 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
NCK1P16333 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
NCK1P16333 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCK1P16333 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
NCK1P16333 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCK1P16333 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms