Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TMIGD3P0DMS9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 LINC02228-203ENST00000641970 1355 ntBASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 AC127496.7-201ENST00000625110 1798 ntBASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 KRT18P5-201ENST00000436075 1291 ntBASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 CCDC92B-201ENST00000575506 885 ntBASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMIGD3P0DMS9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 AC137767.1-201ENST00000602918 1920 ntBASIC19.47■□□□□ 0.71
TMIGD3P0DMS9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.46■□□□□ 0.71
TMIGD3P0DMS9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 AC010141.3-201ENST00000456659 717 ntBASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 KRT18P14-201ENST00000534205 1250 ntBASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TMIGD3P0DMS9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
TMIGD3P0DMS9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMIGD3P0DMS9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms