Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNRPA1P09661 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SNRPA1P09661 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNRPA1P09661 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SNRPA1P09661 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.63■■■□□ 2.01
SNRPA1P09661 AC087742.1-201ENST00000575880 1738 ntBASIC27.62■■■□□ 2.01
SNRPA1P09661 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SNRPA1P09661 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNRPA1P09661 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNRPA1P09661 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
SNRPA1P09661 MIR663A-201ENST00000385250 93 ntBASIC27.62■■■□□ 2.01
SNRPA1P09661 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.62■■■□□ 2.01
SNRPA1P09661 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.62■■■□□ 2.01
SNRPA1P09661 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC27.62■■■□□ 2.01
SNRPA1P09661 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.62■■■□□ 2.01
SNRPA1P09661 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNRPA1P09661 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
SNRPA1P09661 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNRPA1P09661 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.62■■■□□ 2.01
SNRPA1P09661 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNRPA1P09661 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.62■■■□□ 2.01
SNRPA1P09661 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.62■■■□□ 2.01
SNRPA1P09661 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SNRPA1P09661 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.61■■■□□ 2.01
SNRPA1P09661 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.61■■■□□ 2.01
SNRPA1P09661 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC27.61■■■□□ 2.01
SNRPA1P09661 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.61■■■□□ 2.01
SNRPA1P09661 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
SNRPA1P09661 DUX4L16-201ENST00000555130 1264 ntBASIC27.61■■■□□ 2.01
SNRPA1P09661 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.61■■■□□ 2.01
SNRPA1P09661 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
SNRPA1P09661 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNRPA1P09661 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNRPA1P09661 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNRPA1P09661 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
SNRPA1P09661 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.6■■■□□ 2.01
SNRPA1P09661 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNRPA1P09661 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.6■■■□□ 2.01
SNRPA1P09661 MYCNOS-205ENST00000641950 531 ntBASIC27.6■■■□□ 2.01
SNRPA1P09661 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC27.6■■■□□ 2.01
SNRPA1P09661 AC137767.1-201ENST00000602918 1920 ntBASIC27.6■■■□□ 2.01
SNRPA1P09661 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
SNRPA1P09661 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC27.6■■■□□ 2.01
SNRPA1P09661 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC27.59■■■□□ 2.01
SNRPA1P09661 AC010141.2-201ENST00000452426 721 ntBASIC27.59■■■□□ 2.01
SNRPA1P09661 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.59■■■□□ 2.01
SNRPA1P09661 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.59■■■□□ 2.01
SNRPA1P09661 AC138907.5-202ENST00000569484 235 ntBASIC27.59■■■□□ 2.01
SNRPA1P09661 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.59■■■□□ 2.01
SNRPA1P09661 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 AL109923.1-201ENST00000618799 583 ntBASIC27.59■■■□□ 2.01
SNRPA1P09661 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SNRPA1P09661 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
SNRPA1P09661 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.58■■■□□ 2.01
SNRPA1P09661 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
SNRPA1P09661 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
SNRPA1P09661 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
SNRPA1P09661 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNRPA1P09661 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.57■■■□□ 2
SNRPA1P09661 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.57■■■□□ 2
SNRPA1P09661 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNRPA1P09661 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.57■■■□□ 2
SNRPA1P09661 MAZ-216ENST00000616501 991 ntTSL 5 BASIC27.57■■■□□ 2
SNRPA1P09661 AC231657.2-201ENST00000624556 255 ntBASIC27.57■■■□□ 2
SNRPA1P09661 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC27.57■■■□□ 2
SNRPA1P09661 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SNRPA1P09661 AP006587.3-201ENST00000525742 1516 ntBASIC27.57■■■□□ 2
SNRPA1P09661 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNRPA1P09661 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.56■■■□□ 2
SNRPA1P09661 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNRPA1P09661 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SNRPA1P09661 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
SNRPA1P09661 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SNRPA1P09661 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC27.56■■■□□ 2
SNRPA1P09661 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC27.56■■■□□ 2
SNRPA1P09661 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
SNRPA1P09661 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.56■■■□□ 2
SNRPA1P09661 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
SNRPA1P09661 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.55■■■□□ 2
SNRPA1P09661 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SNRPA1P09661 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.55■■■□□ 2
SNRPA1P09661 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SNRPA1P09661 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.55■■■□□ 2
SNRPA1P09661 BRI3-207ENST00000539286 699 ntTSL 2 BASIC27.55■■■□□ 2
SNRPA1P09661 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
SNRPA1P09661 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC27.55■■■□□ 2
SNRPA1P09661 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.55■■■□□ 2
SNRPA1P09661 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.55■■■□□ 2
SNRPA1P09661 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC27.55■■■□□ 2
SNRPA1P09661 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
SNRPA1P09661 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.55■■■□□ 2
SNRPA1P09661 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SNRPA1P09661 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SNRPA1P09661 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms