Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.77■■□□□ 1.08
RETP07949 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.77■■□□□ 1.08
RETP07949 DUX4L16-201ENST00000555130 1264 ntBASIC21.77■■□□□ 1.08
RETP07949 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.77■■□□□ 1.08
RETP07949 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.77■■□□□ 1.08
RETP07949 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.77■■□□□ 1.08
RETP07949 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.77■■□□□ 1.08
RETP07949 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RETP07949 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.77■■□□□ 1.08
RETP07949 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RETP07949 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETP07949 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETP07949 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.76■■□□□ 1.07
RETP07949 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RETP07949 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETP07949 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETP07949 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
RETP07949 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RETP07949 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETP07949 AC068587.7-201ENST00000641602 218 ntBASIC21.76■■□□□ 1.07
RETP07949 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RETP07949 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RETP07949 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RETP07949 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.75■■□□□ 1.07
RETP07949 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETP07949 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.75■■□□□ 1.07
RETP07949 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
RETP07949 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
RETP07949 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RETP07949 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETP07949 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
RETP07949 POU5F1P3-201ENST00000428824 1078 ntBASIC21.75■■□□□ 1.07
RETP07949 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.75■■□□□ 1.07
RETP07949 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.75■■□□□ 1.07
RETP07949 ITM2C-210ENST00000620962 501 ntBASIC21.75■■□□□ 1.07
RETP07949 AC144652.1-201ENST00000609974 1624 ntBASIC21.75■■□□□ 1.07
RETP07949 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.75■■□□□ 1.07
RETP07949 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETP07949 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RETP07949 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.74■■□□□ 1.07
RETP07949 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.74■■□□□ 1.07
RETP07949 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.74■■□□□ 1.07
RETP07949 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.74■■□□□ 1.07
RETP07949 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.74■■□□□ 1.07
RETP07949 SMUG1P1-201ENST00000590640 811 ntBASIC21.74■■□□□ 1.07
RETP07949 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RETP07949 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.74■■□□□ 1.07
RETP07949 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETP07949 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
RETP07949 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETP07949 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.73■■□□□ 1.07
RETP07949 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RETP07949 KRT18P29-201ENST00000397031 1267 ntBASIC21.73■■□□□ 1.07
RETP07949 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.73■■□□□ 1.07
RETP07949 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RETP07949 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.73■■□□□ 1.07
RETP07949 AC087239.1-201ENST00000622671 572 ntBASIC21.73■■□□□ 1.07
RETP07949 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RETP07949 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RETP07949 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.73■■□□□ 1.07
RETP07949 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
RETP07949 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETP07949 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETP07949 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RETP07949 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
RETP07949 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETP07949 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RETP07949 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.72■■□□□ 1.07
RETP07949 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
RETP07949 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.72■■□□□ 1.07
RETP07949 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RETP07949 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.72■■□□□ 1.07
RETP07949 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
RETP07949 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RETP07949 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RETP07949 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RETP07949 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.72■■□□□ 1.07
RETP07949 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.71■■□□□ 1.07
RETP07949 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 C9orf163-202ENST00000624034 2573 ntBASIC21.71■■□□□ 1.07
RETP07949 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.71■■□□□ 1.07
RETP07949 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RETP07949 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms