Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN1P07384 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CAPN1P07384 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.15■□□□□ 0.98
CAPN1P07384 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN1P07384 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.15■□□□□ 0.98
CAPN1P07384 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN1P07384 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN1P07384 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CAPN1P07384 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CAPN1P07384 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN1P07384 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CAPN1P07384 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CAPN1P07384 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.14■□□□□ 0.97
CAPN1P07384 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 FBXW4P1-201ENST00000426721 2239 ntBASIC21.14■□□□□ 0.97
CAPN1P07384 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CAPN1P07384 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CAPN1P07384 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN1P07384 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.13■□□□□ 0.97
CAPN1P07384 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.13■□□□□ 0.97
CAPN1P07384 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CAPN1P07384 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
CAPN1P07384 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.13■□□□□ 0.97
CAPN1P07384 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN1P07384 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.12■□□□□ 0.97
CAPN1P07384 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN1P07384 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN1P07384 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN1P07384 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.12■□□□□ 0.97
CAPN1P07384 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN1P07384 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN1P07384 AC007375.3-201ENST00000600936 2314 ntBASIC21.12■□□□□ 0.97
CAPN1P07384 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CAPN1P07384 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CAPN1P07384 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPN1P07384 IRS3P-201ENST00000223076 1006 ntBASIC21.11■□□□□ 0.97
CAPN1P07384 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
CAPN1P07384 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.11■□□□□ 0.97
CAPN1P07384 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN1P07384 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CAPN1P07384 MIR6821-201ENST00000617625 74 ntBASIC21.11■□□□□ 0.97
CAPN1P07384 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.11■□□□□ 0.97
CAPN1P07384 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CAPN1P07384 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CAPN1P07384 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN1P07384 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN1P07384 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN1P07384 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN1P07384 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN1P07384 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CAPN1P07384 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN1P07384 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN1P07384 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN1P07384 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CAPN1P07384 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.1■□□□□ 0.97
CAPN1P07384 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CAPN1P07384 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN1P07384 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN1P07384 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN1P07384 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN1P07384 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN1P07384 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN1P07384 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.09■□□□□ 0.97
CAPN1P07384 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.09■□□□□ 0.97
CAPN1P07384 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CAPN1P07384 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN1P07384 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN1P07384 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.09■□□□□ 0.97
CAPN1P07384 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CAPN1P07384 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.08■□□□□ 0.97
CAPN1P07384 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CAPN1P07384 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.08■□□□□ 0.97
CAPN1P07384 AC097381.1-201ENST00000429019 1296 ntBASIC21.08■□□□□ 0.97
CAPN1P07384 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CAPN1P07384 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
CAPN1P07384 MIR5787-201ENST00000611784 55 ntBASIC21.08■□□□□ 0.97
CAPN1P07384 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CAPN1P07384 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.08■□□□□ 0.96
CAPN1P07384 AC133637.1-201ENST00000624115 1537 ntBASIC21.08■□□□□ 0.96
CAPN1P07384 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms