Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.65□□□□□ -0.22
APOBP04114 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOBP04114 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
APOBP04114 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOBP04114 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC13.65□□□□□ -0.22
APOBP04114 EEF1DP3-203ENST00000566025 782 ntBASIC13.65□□□□□ -0.22
APOBP04114 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.64□□□□□ -0.23
APOBP04114 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBP04114 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
APOBP04114 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBP04114 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.64□□□□□ -0.23
APOBP04114 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.64□□□□□ -0.23
APOBP04114 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
APOBP04114 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.64□□□□□ -0.23
APOBP04114 AL353803.4-201ENST00000565882 1934 ntBASIC13.64□□□□□ -0.23
APOBP04114 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 AC013268.1-206ENST00000638368 961 ntBASIC13.64□□□□□ -0.23
APOBP04114 AC112229.1-201ENST00000639295 961 ntBASIC13.64□□□□□ -0.23
APOBP04114 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOBP04114 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBP04114 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBP04114 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.63□□□□□ -0.23
APOBP04114 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBP04114 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOBP04114 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.63□□□□□ -0.23
APOBP04114 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 MIR1224-201ENST00000408193 85 ntBASIC13.63□□□□□ -0.23
APOBP04114 AL158047.1-201ENST00000445918 881 ntBASIC13.63□□□□□ -0.23
APOBP04114 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.63□□□□□ -0.23
APOBP04114 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOBP04114 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
APOBP04114 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOBP04114 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
APOBP04114 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.62□□□□□ -0.23
APOBP04114 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.62□□□□□ -0.23
APOBP04114 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC13.62□□□□□ -0.23
APOBP04114 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
APOBP04114 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.62□□□□□ -0.23
APOBP04114 AC142381.4-202ENST00000563973 229 ntBASIC13.62□□□□□ -0.23
APOBP04114 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.62□□□□□ -0.23
APOBP04114 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.62□□□□□ -0.23
APOBP04114 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.62□□□□□ -0.23
APOBP04114 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.62□□□□□ -0.23
APOBP04114 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.62□□□□□ -0.23
APOBP04114 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 AC010141.2-201ENST00000452426 721 ntBASIC13.62□□□□□ -0.23
APOBP04114 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
APOBP04114 AC073912.3-201ENST00000624414 853 ntBASIC13.62□□□□□ -0.23
APOBP04114 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.62□□□□□ -0.23
APOBP04114 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC13.62□□□□□ -0.23
APOBP04114 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
APOBP04114 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 USP45-205ENST00000472914 1617 ntTSL 5 BASIC13.61□□□□□ -0.23
APOBP04114 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBP04114 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.61□□□□□ -0.23
APOBP04114 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
APOBP04114 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 AL512625.2-201ENST00000417533 625 ntBASIC13.61□□□□□ -0.23
APOBP04114 AC068587.7-201ENST00000641602 218 ntBASIC13.61□□□□□ -0.23
APOBP04114 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 LINC00543-201ENST00000567234 1845 ntBASIC13.61□□□□□ -0.23
APOBP04114 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
APOBP04114 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC13.61□□□□□ -0.23
APOBP04114 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
APOBP04114 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms