Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.41■□□□□ 0.7
RAF1P04049 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAF1P04049 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.41■□□□□ 0.7
RAF1P04049 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.41■□□□□ 0.7
RAF1P04049 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAF1P04049 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.41■□□□□ 0.7
RAF1P04049 KRT18P5-201ENST00000436075 1291 ntBASIC19.41■□□□□ 0.7
RAF1P04049 SLC47A1P1-202ENST00000449666 945 ntBASIC19.41■□□□□ 0.7
RAF1P04049 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RAF1P04049 MIR3181-201ENST00000578512 73 ntBASIC19.41■□□□□ 0.7
RAF1P04049 AC126544.1-201ENST00000580842 1059 ntBASIC19.41■□□□□ 0.7
RAF1P04049 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.41■□□□□ 0.7
RAF1P04049 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAF1P04049 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RAF1P04049 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAF1P04049 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAF1P04049 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RAF1P04049 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 PKD1P6-201ENST00000343738 4769 ntBASIC19.4■□□□□ 0.7
RAF1P04049 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.4■□□□□ 0.7
RAF1P04049 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.4■□□□□ 0.7
RAF1P04049 AC006455.2-201ENST00000429931 906 ntBASIC19.4■□□□□ 0.7
RAF1P04049 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.4■□□□□ 0.7
RAF1P04049 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.4■□□□□ 0.7
RAF1P04049 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAF1P04049 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.4■□□□□ 0.7
RAF1P04049 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAF1P04049 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
RAF1P04049 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.39■□□□□ 0.69
RAF1P04049 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAF1P04049 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.39■□□□□ 0.69
RAF1P04049 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.39■□□□□ 0.69
RAF1P04049 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.39■□□□□ 0.69
RAF1P04049 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAF1P04049 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.39■□□□□ 0.69
RAF1P04049 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAF1P04049 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RAF1P04049 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAF1P04049 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RAF1P04049 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.38■□□□□ 0.69
RAF1P04049 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.38■□□□□ 0.69
RAF1P04049 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAF1P04049 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAF1P04049 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAF1P04049 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAF1P04049 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAF1P04049 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAF1P04049 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.38■□□□□ 0.69
RAF1P04049 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAF1P04049 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RAF1P04049 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
RAF1P04049 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RAF1P04049 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.37■□□□□ 0.69
RAF1P04049 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAF1P04049 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
RAF1P04049 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.36■□□□□ 0.69
RAF1P04049 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.36■□□□□ 0.69
RAF1P04049 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RAF1P04049 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.36■□□□□ 0.69
RAF1P04049 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
RAF1P04049 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAF1P04049 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms