Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL138781.1-201ENST00000566567 1274 ntBASIC26.65■■□□□ 1.86
COL4A1P02462 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL4A1P02462 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
COL4A1P02462 AP004607.7-201ENST00000527152 1677 ntBASIC26.65■■□□□ 1.86
COL4A1P02462 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
COL4A1P02462 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL4A1P02462 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
COL4A1P02462 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
COL4A1P02462 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL4A1P02462 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL4A1P02462 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.63■■□□□ 1.85
COL4A1P02462 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.63■■□□□ 1.85
COL4A1P02462 AP006587.3-201ENST00000525742 1516 ntBASIC26.63■■□□□ 1.85
COL4A1P02462 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.63■■□□□ 1.85
COL4A1P02462 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.63■■□□□ 1.85
COL4A1P02462 AP001160.3-201ENST00000601484 763 ntBASIC26.63■■□□□ 1.85
COL4A1P02462 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL4A1P02462 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.63■■□□□ 1.85
COL4A1P02462 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A1P02462 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A1P02462 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
COL4A1P02462 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A1P02462 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A1P02462 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A1P02462 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A1P02462 TSPY6P-201ENST00000448518 926 ntBASIC26.62■■□□□ 1.85
COL4A1P02462 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.62■■□□□ 1.85
COL4A1P02462 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC26.62■■□□□ 1.85
COL4A1P02462 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC26.62■■□□□ 1.85
COL4A1P02462 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL4A1P02462 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.61■■□□□ 1.85
COL4A1P02462 AC093323.1-202ENST00000635031 2045 ntBASIC26.61■■□□□ 1.85
COL4A1P02462 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 AC087742.1-201ENST00000575880 1738 ntBASIC26.61■■□□□ 1.85
COL4A1P02462 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 GPX1P1-201ENST00000388829 606 ntBASIC26.61■■□□□ 1.85
COL4A1P02462 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.61■■□□□ 1.85
COL4A1P02462 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.61■■□□□ 1.85
COL4A1P02462 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL4A1P02462 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A1P02462 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
COL4A1P02462 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.6■■□□□ 1.85
COL4A1P02462 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.6■■□□□ 1.85
COL4A1P02462 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A1P02462 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A1P02462 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
COL4A1P02462 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A1P02462 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A1P02462 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC26.6■■□□□ 1.85
COL4A1P02462 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.6■■□□□ 1.85
COL4A1P02462 MIR4651-201ENST00000582622 73 ntBASIC26.6■■□□□ 1.85
COL4A1P02462 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.6■■□□□ 1.85
COL4A1P02462 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL4A1P02462 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
COL4A1P02462 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL4A1P02462 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL4A1P02462 APTR-203ENST00000430801 583 ntTSL 5 BASIC26.59■■□□□ 1.85
COL4A1P02462 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.59■■□□□ 1.85
COL4A1P02462 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.59■■□□□ 1.85
COL4A1P02462 AC138907.5-202ENST00000569484 235 ntBASIC26.59■■□□□ 1.85
COL4A1P02462 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.59■■□□□ 1.85
COL4A1P02462 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.59■■□□□ 1.85
COL4A1P02462 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
COL4A1P02462 AC005181.1-201ENST00000604782 1256 ntBASIC26.59■■□□□ 1.85
COL4A1P02462 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC26.59■■□□□ 1.85
COL4A1P02462 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
COL4A1P02462 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
COL4A1P02462 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC26.58■■□□□ 1.85
COL4A1P02462 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC26.58■■□□□ 1.85
COL4A1P02462 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.58■■□□□ 1.85
COL4A1P02462 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL4A1P02462 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
COL4A1P02462 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
COL4A1P02462 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
COL4A1P02462 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.57■■□□□ 1.84
COL4A1P02462 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A1P02462 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.57■■□□□ 1.84
COL4A1P02462 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.57■■□□□ 1.84
COL4A1P02462 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A1P02462 EEF1DP3-203ENST00000566025 782 ntBASIC26.57■■□□□ 1.84
COL4A1P02462 AC231657.2-201ENST00000624556 255 ntBASIC26.57■■□□□ 1.84
COL4A1P02462 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL4A1P02462 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
COL4A1P02462 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL4A1P02462 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.56■■□□□ 1.84
COL4A1P02462 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC26.56■■□□□ 1.84
COL4A1P02462 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL4A1P02462 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms