Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFP01138 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFP01138 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NGFP01138 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.68■□□□□ 0.58
NGFP01138 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NGFP01138 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.68■□□□□ 0.58
NGFP01138 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.68■□□□□ 0.58
NGFP01138 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.67■□□□□ 0.58
NGFP01138 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.67■□□□□ 0.58
NGFP01138 SMUG1P1-201ENST00000590640 811 ntBASIC18.67■□□□□ 0.58
NGFP01138 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
NGFP01138 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.67■□□□□ 0.58
NGFP01138 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NGFP01138 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NGFP01138 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NGFP01138 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NGFP01138 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
NGFP01138 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NGFP01138 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NGFP01138 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NGFP01138 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NGFP01138 MIR572-201ENST00000384983 95 ntBASIC18.66■□□□□ 0.58
NGFP01138 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.66■□□□□ 0.58
NGFP01138 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.66■□□□□ 0.58
NGFP01138 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NGFP01138 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NGFP01138 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NGFP01138 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NGFP01138 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NGFP01138 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NGFP01138 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.65■□□□□ 0.58
NGFP01138 AC105233.4-201ENST00000642045 216 ntBASIC18.65■□□□□ 0.58
NGFP01138 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.65■□□□□ 0.58
NGFP01138 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.65■□□□□ 0.58
NGFP01138 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.65■□□□□ 0.58
NGFP01138 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NGFP01138 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NGFP01138 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NGFP01138 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NGFP01138 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NGFP01138 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.64■□□□□ 0.57
NGFP01138 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
NGFP01138 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
NGFP01138 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NGFP01138 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.64■□□□□ 0.57
NGFP01138 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.64■□□□□ 0.57
NGFP01138 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NGFP01138 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NGFP01138 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NGFP01138 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.64■□□□□ 0.57
NGFP01138 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.64■□□□□ 0.57
NGFP01138 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NGFP01138 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.64■□□□□ 0.57
NGFP01138 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NGFP01138 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NGFP01138 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.64■□□□□ 0.57
NGFP01138 AC079834.2-201ENST00000609776 1949 ntBASIC18.64■□□□□ 0.57
NGFP01138 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.64■□□□□ 0.57
NGFP01138 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.64■□□□□ 0.57
NGFP01138 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.63■□□□□ 0.57
NGFP01138 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.63■□□□□ 0.57
NGFP01138 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NGFP01138 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.63■□□□□ 0.57
NGFP01138 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NGFP01138 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NGFP01138 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NGFP01138 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NGFP01138 IRS3P-201ENST00000223076 1006 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms