Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
UBL3O95164 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.26■□□□□ 0.67
UBL3O95164 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.26■□□□□ 0.67
UBL3O95164 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
UBL3O95164 MIR4767-201ENST00000582827 78 ntBASIC19.26■□□□□ 0.67
UBL3O95164 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UBL3O95164 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
UBL3O95164 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.26■□□□□ 0.67
UBL3O95164 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBL3O95164 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL3O95164 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL3O95164 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL3O95164 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL3O95164 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UBL3O95164 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.25■□□□□ 0.67
UBL3O95164 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.25■□□□□ 0.67
UBL3O95164 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.25■□□□□ 0.67
UBL3O95164 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL3O95164 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBL3O95164 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
UBL3O95164 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL3O95164 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
UBL3O95164 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.24■□□□□ 0.67
UBL3O95164 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.24■□□□□ 0.67
UBL3O95164 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UBL3O95164 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.24■□□□□ 0.67
UBL3O95164 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
UBL3O95164 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.24■□□□□ 0.67
UBL3O95164 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.24■□□□□ 0.67
UBL3O95164 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL3O95164 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
UBL3O95164 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBL3O95164 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBL3O95164 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBL3O95164 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UBL3O95164 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.24■□□□□ 0.67
UBL3O95164 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBL3O95164 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
UBL3O95164 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL3O95164 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL3O95164 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL3O95164 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UBL3O95164 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.23■□□□□ 0.67
UBL3O95164 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.23■□□□□ 0.67
UBL3O95164 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.23■□□□□ 0.67
UBL3O95164 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.23■□□□□ 0.67
UBL3O95164 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL3O95164 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UBL3O95164 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBL3O95164 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
UBL3O95164 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UBL3O95164 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.22■□□□□ 0.67
UBL3O95164 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBL3O95164 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBL3O95164 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.22■□□□□ 0.67
UBL3O95164 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.22■□□□□ 0.67
UBL3O95164 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBL3O95164 EDA-201ENST00000338901 1233 ntBASIC19.22■□□□□ 0.67
UBL3O95164 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBL3O95164 AC133561.4-201ENST00000566112 224 ntBASIC19.22■□□□□ 0.67
UBL3O95164 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
UBL3O95164 AC080038.3-201ENST00000623346 1952 ntBASIC19.22■□□□□ 0.67
UBL3O95164 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBL3O95164 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
UBL3O95164 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.21■□□□□ 0.67
UBL3O95164 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.21■□□□□ 0.67
UBL3O95164 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.21■□□□□ 0.67
UBL3O95164 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.21■□□□□ 0.67
UBL3O95164 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UBL3O95164 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBL3O95164 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.66
UBL3O95164 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL3O95164 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.2■□□□□ 0.66
UBL3O95164 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL3O95164 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.2■□□□□ 0.66
UBL3O95164 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL3O95164 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBL3O95164 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBL3O95164 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBL3O95164 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
UBL3O95164 BX842568.3-201ENST00000418104 571 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms