Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
NKX2-2O95096 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 AL034346.1-201ENST00000568244 1277 ntBASIC19.95■□□□□ 0.78
NKX2-2O95096 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-2O95096 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NKX2-2O95096 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NKX2-2O95096 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.94■□□□□ 0.78
NKX2-2O95096 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NKX2-2O95096 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.94■□□□□ 0.78
NKX2-2O95096 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NKX2-2O95096 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NKX2-2O95096 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NKX2-2O95096 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.93■□□□□ 0.78
NKX2-2O95096 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.93■□□□□ 0.78
NKX2-2O95096 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NKX2-2O95096 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
NKX2-2O95096 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.93■□□□□ 0.78
NKX2-2O95096 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NKX2-2O95096 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.93■□□□□ 0.78
NKX2-2O95096 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.93■□□□□ 0.78
NKX2-2O95096 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.93■□□□□ 0.78
NKX2-2O95096 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.93■□□□□ 0.78
NKX2-2O95096 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
NKX2-2O95096 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
NKX2-2O95096 AP004607.7-201ENST00000527152 1677 ntBASIC19.93■□□□□ 0.78
NKX2-2O95096 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NKX2-2O95096 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NKX2-2O95096 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.92■□□□□ 0.78
NKX2-2O95096 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.92■□□□□ 0.78
NKX2-2O95096 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.92■□□□□ 0.78
NKX2-2O95096 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 AC142381.2-201ENST00000566120 298 ntBASIC19.92■□□□□ 0.78
NKX2-2O95096 AC005837.3-201ENST00000612163 286 ntBASIC19.92■□□□□ 0.78
NKX2-2O95096 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.92■□□□□ 0.78
NKX2-2O95096 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NKX2-2O95096 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NKX2-2O95096 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-2O95096 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.91■□□□□ 0.78
NKX2-2O95096 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.91■□□□□ 0.78
NKX2-2O95096 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.91■□□□□ 0.78
NKX2-2O95096 MIR572-201ENST00000384983 95 ntBASIC19.91■□□□□ 0.78
NKX2-2O95096 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-2O95096 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-2O95096 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NKX2-2O95096 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.91■□□□□ 0.78
NKX2-2O95096 AC010542.4-201ENST00000563151 1910 ntBASIC19.9■□□□□ 0.78
NKX2-2O95096 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.9■□□□□ 0.78
NKX2-2O95096 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 MIR638-201ENST00000385237 100 ntBASIC19.9■□□□□ 0.78
NKX2-2O95096 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.9■□□□□ 0.78
NKX2-2O95096 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.9■□□□□ 0.78
NKX2-2O95096 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NKX2-2O95096 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NKX2-2O95096 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NKX2-2O95096 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NKX2-2O95096 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX2-2O95096 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
NKX2-2O95096 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NKX2-2O95096 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX2-2O95096 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.89■□□□□ 0.77
NKX2-2O95096 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.89■□□□□ 0.77
NKX2-2O95096 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms