Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
LTN1O94822 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
LTN1O94822 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
LTN1O94822 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC28.94■■■□□ 2.22
LTN1O94822 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC28.94■■■□□ 2.22
LTN1O94822 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
LTN1O94822 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC28.94■■■□□ 2.22
LTN1O94822 LINC00526-201ENST00000581067 1875 ntBASIC28.94■■■□□ 2.22
LTN1O94822 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.93■■■□□ 2.22
LTN1O94822 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.93■■■□□ 2.22
LTN1O94822 EEF1DP3-203ENST00000566025 782 ntBASIC28.93■■■□□ 2.22
LTN1O94822 AP001160.3-201ENST00000601484 763 ntBASIC28.93■■■□□ 2.22
LTN1O94822 AC010536.3-201ENST00000620306 533 ntBASIC28.93■■■□□ 2.22
LTN1O94822 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
LTN1O94822 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
LTN1O94822 FXN-202ENST00000396364 980 ntTSL 5 BASIC28.93■■■□□ 2.22
LTN1O94822 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
LTN1O94822 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.92■■■□□ 2.22
LTN1O94822 AC069152.1-201ENST00000438030 544 ntBASIC28.92■■■□□ 2.22
LTN1O94822 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
LTN1O94822 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
LTN1O94822 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
LTN1O94822 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
LTN1O94822 AF201337.1-201ENST00000520239 748 ntBASIC28.91■■■□□ 2.22
LTN1O94822 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
LTN1O94822 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
LTN1O94822 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC28.91■■■□□ 2.22
LTN1O94822 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.91■■■□□ 2.22
LTN1O94822 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
LTN1O94822 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.91■■■□□ 2.22
LTN1O94822 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
LTN1O94822 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 AC013268.1-206ENST00000638368 961 ntBASIC28.9■■■□□ 2.22
LTN1O94822 AC112229.1-201ENST00000639295 961 ntBASIC28.9■■■□□ 2.22
LTN1O94822 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
LTN1O94822 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.9■■■□□ 2.22
LTN1O94822 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.9■■■□□ 2.22
LTN1O94822 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.9■■■□□ 2.22
LTN1O94822 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
LTN1O94822 CD99P1-205ENST00000527459 561 ntBASIC28.9■■■□□ 2.22
LTN1O94822 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
LTN1O94822 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
LTN1O94822 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
LTN1O94822 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC28.89■■■□□ 2.22
LTN1O94822 APTR-203ENST00000430801 583 ntTSL 5 BASIC28.89■■■□□ 2.22
LTN1O94822 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC28.89■■■□□ 2.22
LTN1O94822 OR7E47P-201ENST00000546390 1422 ntBASIC28.89■■■□□ 2.22
LTN1O94822 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
LTN1O94822 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
LTN1O94822 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
LTN1O94822 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
LTN1O94822 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.88■■■□□ 2.21
LTN1O94822 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
LTN1O94822 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
LTN1O94822 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC28.87■■■□□ 2.21
LTN1O94822 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC28.87■■■□□ 2.21
LTN1O94822 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
LTN1O94822 AC083906.2-201ENST00000511578 360 ntBASIC28.87■■■□□ 2.21
LTN1O94822 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC28.87■■■□□ 2.21
LTN1O94822 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
LTN1O94822 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.86■■■□□ 2.21
LTN1O94822 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC28.86■■■□□ 2.21
LTN1O94822 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC28.86■■■□□ 2.21
LTN1O94822 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
LTN1O94822 NAA20-201ENST00000310450 920 ntTSL 2 BASIC28.85■■■□□ 2.21
LTN1O94822 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
LTN1O94822 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
LTN1O94822 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
LTN1O94822 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC28.85■■■□□ 2.21
LTN1O94822 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.85■■■□□ 2.21
LTN1O94822 KLF13-207ENST00000560473 489 ntTSL 3 BASIC28.85■■■□□ 2.21
LTN1O94822 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
LTN1O94822 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
LTN1O94822 PHB2-213ENST00000546111 858 ntTSL 2 BASIC28.84■■■□□ 2.21
LTN1O94822 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC28.84■■■□□ 2.21
LTN1O94822 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
LTN1O94822 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
LTN1O94822 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
LTN1O94822 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
LTN1O94822 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC28.83■■■□□ 2.21
LTN1O94822 AC007322.4-201ENST00000509611 723 ntBASIC28.83■■■□□ 2.21
LTN1O94822 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.83■■■□□ 2.21
LTN1O94822 AC133552.2-202ENST00000575694 574 ntBASIC28.83■■■□□ 2.21
LTN1O94822 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
LTN1O94822 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
LTN1O94822 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.83■■■□□ 2.21
LTN1O94822 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
LTN1O94822 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC28.83■■■□□ 2.2
LTN1O94822 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC28.83■■■□□ 2.2
LTN1O94822 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
LTN1O94822 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.82■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms