Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.37■□□□□ 0.53
TSPAN9O75954 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.37■□□□□ 0.53
TSPAN9O75954 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TSPAN9O75954 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.37■□□□□ 0.53
TSPAN9O75954 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.37■□□□□ 0.53
TSPAN9O75954 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TSPAN9O75954 AL020996.1-203ENST00000536896 2307 ntBASIC18.37■□□□□ 0.53
TSPAN9O75954 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TSPAN9O75954 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.36■□□□□ 0.53
TSPAN9O75954 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.36■□□□□ 0.53
TSPAN9O75954 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.36■□□□□ 0.53
TSPAN9O75954 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TSPAN9O75954 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.35■□□□□ 0.53
TSPAN9O75954 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TSPAN9O75954 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.35■□□□□ 0.53
TSPAN9O75954 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 AC096631.2-201ENST00000436136 790 ntBASIC18.35■□□□□ 0.53
TSPAN9O75954 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.35■□□□□ 0.53
TSPAN9O75954 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TSPAN9O75954 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 AC133561.4-201ENST00000566112 224 ntBASIC18.35■□□□□ 0.53
TSPAN9O75954 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TSPAN9O75954 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TSPAN9O75954 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
TSPAN9O75954 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN9O75954 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TSPAN9O75954 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN9O75954 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TSPAN9O75954 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN9O75954 AL161729.1-201ENST00000604104 1402 ntBASIC18.34■□□□□ 0.53
TSPAN9O75954 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN9O75954 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
TSPAN9O75954 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN9O75954 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TSPAN9O75954 MIR935-201ENST00000401179 91 ntBASIC18.34■□□□□ 0.53
TSPAN9O75954 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.34■□□□□ 0.53
TSPAN9O75954 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.34■□□□□ 0.53
TSPAN9O75954 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.34■□□□□ 0.53
TSPAN9O75954 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.34■□□□□ 0.53
TSPAN9O75954 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.34■□□□□ 0.53
TSPAN9O75954 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TSPAN9O75954 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN9O75954 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TSPAN9O75954 LETM1P2-201ENST00000597330 2178 ntBASIC18.34■□□□□ 0.53
TSPAN9O75954 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TSPAN9O75954 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.34■□□□□ 0.53
TSPAN9O75954 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TSPAN9O75954 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.33■□□□□ 0.53
TSPAN9O75954 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN9O75954 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN9O75954 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN9O75954 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN9O75954 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.53
TSPAN9O75954 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TSPAN9O75954 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.33■□□□□ 0.52
TSPAN9O75954 AC004448.1-201ENST00000458332 883 ntBASIC18.33■□□□□ 0.52
TSPAN9O75954 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN9O75954 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN9O75954 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
TSPAN9O75954 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN9O75954 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TSPAN9O75954 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
TSPAN9O75954 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.33■□□□□ 0.52
TSPAN9O75954 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.33■□□□□ 0.52
TSPAN9O75954 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TSPAN9O75954 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TSPAN9O75954 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms