Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 ZNRF2P3-201ENST00000424200 374 ntBASIC21.61■■□□□ 1.05
RFPL1O75677 SRD5A1P1-201ENST00000442297 786 ntBASIC21.61■■□□□ 1.05
RFPL1O75677 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.61■■□□□ 1.05
RFPL1O75677 AL136162.1-201ENST00000607711 1078 ntBASIC21.61■■□□□ 1.05
RFPL1O75677 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RFPL1O75677 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RFPL1O75677 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RFPL1O75677 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RFPL1O75677 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RFPL1O75677 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.6■■□□□ 1.05
RFPL1O75677 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.6■■□□□ 1.05
RFPL1O75677 RARRES2P6-201ENST00000567333 442 ntBASIC21.6■■□□□ 1.05
RFPL1O75677 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.6■■□□□ 1.05
RFPL1O75677 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFPL1O75677 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RFPL1O75677 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.6■■□□□ 1.05
RFPL1O75677 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RFPL1O75677 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL1O75677 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RFPL1O75677 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL1O75677 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.59■■□□□ 1.05
RFPL1O75677 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RFPL1O75677 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL1O75677 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFPL1O75677 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.59■■□□□ 1.05
RFPL1O75677 Z98882.1-201ENST00000622160 2253 ntBASIC21.59■■□□□ 1.05
RFPL1O75677 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.59■■□□□ 1.05
RFPL1O75677 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.59■■□□□ 1.05
RFPL1O75677 AC135279.3-201ENST00000610945 1311 ntBASIC21.58■■□□□ 1.05
RFPL1O75677 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.58■■□□□ 1.05
RFPL1O75677 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFPL1O75677 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFPL1O75677 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFPL1O75677 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFPL1O75677 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.58■■□□□ 1.05
RFPL1O75677 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
RFPL1O75677 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.58■■□□□ 1.04
RFPL1O75677 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.58■■□□□ 1.04
RFPL1O75677 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFPL1O75677 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.57■■□□□ 1.04
RFPL1O75677 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL1O75677 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL1O75677 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL1O75677 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL1O75677 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RFPL1O75677 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.57■■□□□ 1.04
RFPL1O75677 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL1O75677 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RFPL1O75677 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL1O75677 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
RFPL1O75677 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFPL1O75677 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.56■■□□□ 1.04
RFPL1O75677 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.56■■□□□ 1.04
RFPL1O75677 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RFPL1O75677 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFPL1O75677 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RFPL1O75677 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.55■■□□□ 1.04
RFPL1O75677 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
RFPL1O75677 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
RFPL1O75677 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.55■■□□□ 1.04
RFPL1O75677 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
RFPL1O75677 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFPL1O75677 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL1O75677 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL1O75677 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL1O75677 EDA-201ENST00000338901 1233 ntBASIC21.54■■□□□ 1.04
RFPL1O75677 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFPL1O75677 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms