Protein–RNA interactions for Protein: O60516

EIF4EBP3, Eukaryotic translation initiation factor 4E-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4EBP3O60516 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 AC133552.2-201ENST00000619106 1032 ntBASIC14.36□□□□□ -0.11
EIF4EBP3O60516 SRP68-213ENST00000629930 165 ntTSL 5 BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
EIF4EBP3O60516 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
EIF4EBP3O60516 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 CEP120-209ENST00000515110 606 ntTSL 3 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
EIF4EBP3O60516 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
EIF4EBP3O60516 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.33□□□□□ -0.12
EIF4EBP3O60516 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
EIF4EBP3O60516 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms