Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDH7O60245 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDH7O60245 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH7O60245 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDH7O60245 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDH7O60245 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH7O60245 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH7O60245 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDH7O60245 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH7O60245 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDH7O60245 OXCT2P1-201ENST00000447263 1535 ntBASIC20.57■□□□□ 0.88
PCDH7O60245 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PCDH7O60245 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDH7O60245 UNC93B3-201ENST00000308076 687 ntBASIC20.56■□□□□ 0.88
PCDH7O60245 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH7O60245 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH7O60245 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH7O60245 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH7O60245 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDH7O60245 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PCDH7O60245 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH7O60245 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH7O60245 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH7O60245 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH7O60245 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH7O60245 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH7O60245 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDH7O60245 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH7O60245 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.55■□□□□ 0.88
PCDH7O60245 AP005435.1-201ENST00000529293 1178 ntBASIC20.55■□□□□ 0.88
PCDH7O60245 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDH7O60245 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDH7O60245 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDH7O60245 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH7O60245 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDH7O60245 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH7O60245 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH7O60245 MIR4767-201ENST00000582827 78 ntBASIC20.54■□□□□ 0.88
PCDH7O60245 AC008406.3-201ENST00000620001 1374 ntBASIC20.54■□□□□ 0.88
PCDH7O60245 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDH7O60245 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDH7O60245 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDH7O60245 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDH7O60245 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDH7O60245 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH7O60245 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDH7O60245 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH7O60245 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH7O60245 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDH7O60245 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH7O60245 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH7O60245 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH7O60245 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
PCDH7O60245 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PCDH7O60245 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH7O60245 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH7O60245 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDH7O60245 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDH7O60245 AL136162.1-201ENST00000607711 1078 ntBASIC20.52■□□□□ 0.88
PCDH7O60245 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDH7O60245 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDH7O60245 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH7O60245 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PCDH7O60245 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.51■□□□□ 0.87
PCDH7O60245 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PCDH7O60245 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDH7O60245 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH7O60245 AC024257.2-201ENST00000549699 147 ntBASIC20.51■□□□□ 0.87
PCDH7O60245 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH7O60245 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH7O60245 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH7O60245 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PCDH7O60245 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH7O60245 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH7O60245 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDH7O60245 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 AC135279.3-201ENST00000610945 1311 ntBASIC20.5■□□□□ 0.87
PCDH7O60245 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH7O60245 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDH7O60245 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH7O60245 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms