Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SSSCA1O60232 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.53■□□□□ 0.4
SSSCA1O60232 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.52■□□□□ 0.4
SSSCA1O60232 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SSSCA1O60232 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.52■□□□□ 0.4
SSSCA1O60232 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.52■□□□□ 0.4
SSSCA1O60232 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
SSSCA1O60232 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SSSCA1O60232 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.52■□□□□ 0.4
SSSCA1O60232 SNX5-217ENST00000606557 1087 ntBASIC17.52■□□□□ 0.4
SSSCA1O60232 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
SSSCA1O60232 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SSSCA1O60232 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.52■□□□□ 0.39
SSSCA1O60232 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSSCA1O60232 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSSCA1O60232 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SSSCA1O60232 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SSSCA1O60232 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SSSCA1O60232 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSSCA1O60232 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSSCA1O60232 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SSSCA1O60232 AC004687.1-201ENST00000579003 1625 ntBASIC17.51■□□□□ 0.39
SSSCA1O60232 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSSCA1O60232 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SSSCA1O60232 CA15P2-201ENST00000611168 834 ntBASIC17.51■□□□□ 0.39
SSSCA1O60232 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.51■□□□□ 0.39
SSSCA1O60232 BHLHE23-202ENST00000612929 1109 ntBASIC17.51■□□□□ 0.39
SSSCA1O60232 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSSCA1O60232 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SSSCA1O60232 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SSSCA1O60232 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.51■□□□□ 0.39
SSSCA1O60232 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SSSCA1O60232 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.5■□□□□ 0.39
SSSCA1O60232 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.5■□□□□ 0.39
SSSCA1O60232 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.5■□□□□ 0.39
SSSCA1O60232 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.5■□□□□ 0.39
SSSCA1O60232 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SSSCA1O60232 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SSSCA1O60232 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.5■□□□□ 0.39
SSSCA1O60232 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SSSCA1O60232 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.5■□□□□ 0.39
SSSCA1O60232 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SSSCA1O60232 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
SSSCA1O60232 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SSSCA1O60232 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.49■□□□□ 0.39
SSSCA1O60232 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.49■□□□□ 0.39
SSSCA1O60232 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SSSCA1O60232 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.49■□□□□ 0.39
SSSCA1O60232 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SSSCA1O60232 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SSSCA1O60232 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
SSSCA1O60232 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SSSCA1O60232 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.48■□□□□ 0.39
SSSCA1O60232 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 RARRES2P2-201ENST00000394842 485 ntBASIC17.48■□□□□ 0.39
SSSCA1O60232 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.48■□□□□ 0.39
SSSCA1O60232 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.48■□□□□ 0.39
SSSCA1O60232 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SSSCA1O60232 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms