Protein–RNA interactions for Protein: O43639

NCK2, Cytoplasmic protein NCK2, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK2O43639 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 AC133637.1-201ENST00000624115 1537 ntBASIC23.74■■□□□ 1.39
NCK2O43639 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
NCK2O43639 AC127496.7-201ENST00000625110 1798 ntBASIC23.74■■□□□ 1.39
NCK2O43639 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.74■■□□□ 1.39
NCK2O43639 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 AC016769.1-201ENST00000409132 1010 ntBASIC23.74■■□□□ 1.39
NCK2O43639 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.74■■□□□ 1.39
NCK2O43639 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.74■■□□□ 1.39
NCK2O43639 AC007375.3-201ENST00000600936 2314 ntBASIC23.74■■□□□ 1.39
NCK2O43639 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.74■■□□□ 1.39
NCK2O43639 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NCK2O43639 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
NCK2O43639 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NCK2O43639 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NCK2O43639 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.73■■□□□ 1.39
NCK2O43639 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.73■■□□□ 1.39
NCK2O43639 RAP2CP1-201ENST00000605103 478 ntBASIC23.73■■□□□ 1.39
NCK2O43639 GXYLT1P5-201ENST00000614548 1189 ntBASIC23.73■■□□□ 1.39
NCK2O43639 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
NCK2O43639 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.73■■□□□ 1.39
NCK2O43639 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NCK2O43639 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.73■■□□□ 1.39
NCK2O43639 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.73■■□□□ 1.39
NCK2O43639 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NCK2O43639 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NCK2O43639 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
NCK2O43639 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.73■■□□□ 1.39
NCK2O43639 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
NCK2O43639 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.72■■□□□ 1.39
NCK2O43639 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NCK2O43639 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
NCK2O43639 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.72■■□□□ 1.39
NCK2O43639 AP005435.1-201ENST00000529293 1178 ntBASIC23.72■■□□□ 1.39
NCK2O43639 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.72■■□□□ 1.39
NCK2O43639 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NCK2O43639 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
NCK2O43639 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NCK2O43639 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NCK2O43639 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.71■■□□□ 1.39
NCK2O43639 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NCK2O43639 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
NCK2O43639 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NCK2O43639 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.71■■□□□ 1.39
NCK2O43639 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
NCK2O43639 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
NCK2O43639 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NCK2O43639 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
NCK2O43639 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
NCK2O43639 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NCK2O43639 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.7■■□□□ 1.38
NCK2O43639 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
NCK2O43639 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NCK2O43639 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NCK2O43639 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.7■■□□□ 1.38
NCK2O43639 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
NCK2O43639 CDCA4P2-201ENST00000441182 718 ntBASIC23.7■■□□□ 1.38
NCK2O43639 AC026185.1-201ENST00000445748 174 ntBASIC23.7■■□□□ 1.38
NCK2O43639 OR2I1P-207ENST00000453522 948 ntBASIC23.7■■□□□ 1.38
NCK2O43639 AC137761.2-201ENST00000561729 223 ntBASIC23.7■■□□□ 1.38
NCK2O43639 AC145350.3-201ENST00000569033 163 ntBASIC23.7■■□□□ 1.38
NCK2O43639 AL499627.2-201ENST00000606283 725 ntBASIC23.7■■□□□ 1.38
NCK2O43639 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.7■■□□□ 1.38
NCK2O43639 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NCK2O43639 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NCK2O43639 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NCK2O43639 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
NCK2O43639 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.69■■□□□ 1.38
NCK2O43639 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NCK2O43639 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
NCK2O43639 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.69■■□□□ 1.38
NCK2O43639 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.69■■□□□ 1.38
NCK2O43639 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.69■■□□□ 1.38
NCK2O43639 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.69■■□□□ 1.38
NCK2O43639 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NCK2O43639 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NCK2O43639 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.69■■□□□ 1.38
NCK2O43639 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NCK2O43639 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.68■■□□□ 1.38
NCK2O43639 AC242852.2-201ENST00000615738 1807 ntBASIC23.68■■□□□ 1.38
NCK2O43639 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NCK2O43639 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NCK2O43639 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.68■■□□□ 1.38
NCK2O43639 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
NCK2O43639 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
NCK2O43639 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
NCK2O43639 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NCK2O43639 AC073111.5-205ENST00000641717 521 ntBASIC23.68■■□□□ 1.38
NCK2O43639 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NCK2O43639 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NCK2O43639 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.68■■□□□ 1.38
NCK2O43639 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NCK2O43639 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms