Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC068473.5-201ENST00000616428 2072 ntBASIC21.86■■□□□ 1.09
SMAD6O43541 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SMAD6O43541 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.86■■□□□ 1.09
SMAD6O43541 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
SMAD6O43541 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SMAD6O43541 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.86■■□□□ 1.09
SMAD6O43541 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.86■■□□□ 1.09
SMAD6O43541 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMAD6O43541 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SMAD6O43541 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMAD6O43541 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMAD6O43541 AC127496.7-201ENST00000625110 1798 ntBASIC21.85■■□□□ 1.09
SMAD6O43541 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.85■■□□□ 1.09
SMAD6O43541 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
SMAD6O43541 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.85■■□□□ 1.09
SMAD6O43541 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMAD6O43541 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.85■■□□□ 1.09
SMAD6O43541 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.85■■□□□ 1.09
SMAD6O43541 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.85■■□□□ 1.09
SMAD6O43541 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.85■■□□□ 1.09
SMAD6O43541 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.85■■□□□ 1.09
SMAD6O43541 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD6O43541 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
SMAD6O43541 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD6O43541 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD6O43541 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMAD6O43541 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SMAD6O43541 AC022517.1-201ENST00000592429 346 ntBASIC21.84■■□□□ 1.09
SMAD6O43541 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.84■■□□□ 1.09
SMAD6O43541 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD6O43541 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.84■■□□□ 1.09
SMAD6O43541 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMAD6O43541 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.83■■□□□ 1.09
SMAD6O43541 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.83■■□□□ 1.09
SMAD6O43541 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.83■■□□□ 1.09
SMAD6O43541 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SMAD6O43541 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.83■■□□□ 1.09
SMAD6O43541 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SMAD6O43541 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
SMAD6O43541 AC055733.4-201ENST00000638462 1354 ntBASIC21.83■■□□□ 1.08
SMAD6O43541 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMAD6O43541 AP004607.4-201ENST00000530158 1459 ntBASIC21.83■■□□□ 1.08
SMAD6O43541 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SMAD6O43541 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
SMAD6O43541 AC004854.2-201ENST00000608450 1441 ntBASIC21.82■■□□□ 1.08
SMAD6O43541 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.82■■□□□ 1.08
SMAD6O43541 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD6O43541 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD6O43541 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD6O43541 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.82■■□□□ 1.08
SMAD6O43541 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.82■■□□□ 1.08
SMAD6O43541 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.82■■□□□ 1.08
SMAD6O43541 IKBKGP1-201ENST00000612193 1073 ntBASIC21.82■■□□□ 1.08
SMAD6O43541 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.82■■□□□ 1.08
SMAD6O43541 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD6O43541 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
SMAD6O43541 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD6O43541 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SMAD6O43541 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.81■■□□□ 1.08
SMAD6O43541 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMAD6O43541 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMAD6O43541 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMAD6O43541 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.81■■□□□ 1.08
SMAD6O43541 AC079140.4-201ENST00000507448 529 ntBASIC21.81■■□□□ 1.08
SMAD6O43541 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMAD6O43541 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.8■■□□□ 1.08
SMAD6O43541 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SMAD6O43541 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMAD6O43541 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.8■■□□□ 1.08
SMAD6O43541 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.79■■□□□ 1.08
SMAD6O43541 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.79■■□□□ 1.08
SMAD6O43541 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
SMAD6O43541 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.79■■□□□ 1.08
SMAD6O43541 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.79■■□□□ 1.08
SMAD6O43541 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.79■■□□□ 1.08
SMAD6O43541 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.79■■□□□ 1.08
SMAD6O43541 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.79■■□□□ 1.08
SMAD6O43541 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.79■■□□□ 1.08
SMAD6O43541 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMAD6O43541 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms