Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RRP8O43159 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.32■□□□□ 0.84
RRP8O43159 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.31■□□□□ 0.84
RRP8O43159 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.31■□□□□ 0.84
RRP8O43159 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.31■□□□□ 0.84
RRP8O43159 ESRRAP1-201ENST00000400596 1257 ntBASIC20.31■□□□□ 0.84
RRP8O43159 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.31■□□□□ 0.84
RRP8O43159 AC142381.4-202ENST00000563973 229 ntBASIC20.31■□□□□ 0.84
RRP8O43159 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
RRP8O43159 AC022211.4-201ENST00000625094 2161 ntBASIC20.31■□□□□ 0.84
RRP8O43159 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RRP8O43159 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RRP8O43159 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.3■□□□□ 0.84
RRP8O43159 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RRP8O43159 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.3■□□□□ 0.84
RRP8O43159 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.3■□□□□ 0.84
RRP8O43159 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.3■□□□□ 0.84
RRP8O43159 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.3■□□□□ 0.84
RRP8O43159 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.3■□□□□ 0.84
RRP8O43159 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.3■□□□□ 0.84
RRP8O43159 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 AL139125.2-201ENST00000623134 1869 ntBASIC20.3■□□□□ 0.84
RRP8O43159 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RRP8O43159 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.3■□□□□ 0.84
RRP8O43159 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.29■□□□□ 0.84
RRP8O43159 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 AL596275.1-201ENST00000423464 877 ntBASIC20.29■□□□□ 0.84
RRP8O43159 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.29■□□□□ 0.84
RRP8O43159 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.29■□□□□ 0.84
RRP8O43159 AC092118.2-201ENST00000613495 667 ntBASIC20.29■□□□□ 0.84
RRP8O43159 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RRP8O43159 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RRP8O43159 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RRP8O43159 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.28■□□□□ 0.84
RRP8O43159 AC138932.3-201ENST00000567634 1902 ntBASIC20.28■□□□□ 0.84
RRP8O43159 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RRP8O43159 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
RRP8O43159 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RRP8O43159 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RRP8O43159 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.28■□□□□ 0.84
RRP8O43159 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.28■□□□□ 0.84
RRP8O43159 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.28■□□□□ 0.84
RRP8O43159 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.28■□□□□ 0.84
RRP8O43159 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RRP8O43159 OR10C1-204ENST00000622521 1039 ntBASIC20.28■□□□□ 0.84
RRP8O43159 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RRP8O43159 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RRP8O43159 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RRP8O43159 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.27■□□□□ 0.84
RRP8O43159 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.27■□□□□ 0.84
RRP8O43159 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.27■□□□□ 0.84
RRP8O43159 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.27■□□□□ 0.84
RRP8O43159 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.27■□□□□ 0.84
RRP8O43159 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RRP8O43159 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RRP8O43159 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RRP8O43159 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
RRP8O43159 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.26■□□□□ 0.83
RRP8O43159 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
RRP8O43159 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.26■□□□□ 0.83
RRP8O43159 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RRP8O43159 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RRP8O43159 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
RRP8O43159 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.26■□□□□ 0.83
RRP8O43159 CYP2T1P-201ENST00000432607 1285 ntBASIC20.26■□□□□ 0.83
RRP8O43159 AC097658.1-201ENST00000475555 843 ntBASIC20.26■□□□□ 0.83
RRP8O43159 TERF1P5-201ENST00000477545 1207 ntBASIC20.26■□□□□ 0.83
RRP8O43159 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.26■□□□□ 0.83
RRP8O43159 AC069236.1-201ENST00000604339 616 ntBASIC20.26■□□□□ 0.83
RRP8O43159 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RRP8O43159 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RRP8O43159 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms