Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NKX2-8O15522 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.03■□□□□ 0.8
NKX2-8O15522 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-8O15522 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NKX2-8O15522 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-8O15522 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-8O15522 AC010141.2-201ENST00000452426 721 ntBASIC20.02■□□□□ 0.8
NKX2-8O15522 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.02■□□□□ 0.8
NKX2-8O15522 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.02■□□□□ 0.8
NKX2-8O15522 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.02■□□□□ 0.8
NKX2-8O15522 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.02■□□□□ 0.8
NKX2-8O15522 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.02■□□□□ 0.8
NKX2-8O15522 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-8O15522 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NKX2-8O15522 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NKX2-8O15522 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-8O15522 AP004607.7-201ENST00000527152 1677 ntBASIC20.01■□□□□ 0.79
NKX2-8O15522 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NKX2-8O15522 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.01■□□□□ 0.79
NKX2-8O15522 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.01■□□□□ 0.79
NKX2-8O15522 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.01■□□□□ 0.79
NKX2-8O15522 AC138907.5-202ENST00000569484 235 ntBASIC20.01■□□□□ 0.79
NKX2-8O15522 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-8O15522 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-8O15522 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NKX2-8O15522 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-8O15522 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20■□□□□ 0.79
NKX2-8O15522 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-8O15522 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NKX2-8O15522 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20■□□□□ 0.79
NKX2-8O15522 AC073210.2-201ENST00000430369 194 ntBASIC20■□□□□ 0.79
NKX2-8O15522 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20■□□□□ 0.79
NKX2-8O15522 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20■□□□□ 0.79
NKX2-8O15522 KRT18P20-201ENST00000548986 1279 ntBASIC20■□□□□ 0.79
NKX2-8O15522 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20■□□□□ 0.79
NKX2-8O15522 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20■□□□□ 0.79
NKX2-8O15522 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NKX2-8O15522 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-8O15522 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-8O15522 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-8O15522 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-8O15522 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.99■□□□□ 0.79
NKX2-8O15522 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NKX2-8O15522 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
NKX2-8O15522 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-8O15522 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.99■□□□□ 0.79
NKX2-8O15522 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-8O15522 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-8O15522 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NKX2-8O15522 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-8O15522 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NKX2-8O15522 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.99■□□□□ 0.79
NKX2-8O15522 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-8O15522 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.98■□□□□ 0.79
NKX2-8O15522 ANOS2P-203ENST00000472227 1816 ntBASIC19.98■□□□□ 0.79
NKX2-8O15522 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
NKX2-8O15522 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-8O15522 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.98■□□□□ 0.79
NKX2-8O15522 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
NKX2-8O15522 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.98■□□□□ 0.79
NKX2-8O15522 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-8O15522 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
NKX2-8O15522 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.98■□□□□ 0.79
NKX2-8O15522 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NKX2-8O15522 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.97■□□□□ 0.79
NKX2-8O15522 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-8O15522 LINC01960-201ENST00000563759 1884 ntBASIC19.97■□□□□ 0.79
NKX2-8O15522 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-8O15522 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-8O15522 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-8O15522 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-8O15522 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.97■□□□□ 0.79
NKX2-8O15522 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.97■□□□□ 0.79
NKX2-8O15522 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-8O15522 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NKX2-8O15522 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NKX2-8O15522 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-8O15522 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-8O15522 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-8O15522 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.96■□□□□ 0.79
NKX2-8O15522 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NKX2-8O15522 TERF1P5-201ENST00000477545 1207 ntBASIC19.96■□□□□ 0.79
NKX2-8O15522 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-8O15522 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-8O15522 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-8O15522 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NKX2-8O15522 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
NKX2-8O15522 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.95■□□□□ 0.78
NKX2-8O15522 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.95■□□□□ 0.78
NKX2-8O15522 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-8O15522 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NKX2-8O15522 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.95■□□□□ 0.78
NKX2-8O15522 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.95■□□□□ 0.78
NKX2-8O15522 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.95■□□□□ 0.78
NKX2-8O15522 AC008687.6-201ENST00000596318 630 ntBASIC19.95■□□□□ 0.78
NKX2-8O15522 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
NKX2-8O15522 AC013268.1-206ENST00000638368 961 ntBASIC19.95■□□□□ 0.78
NKX2-8O15522 AC112229.1-201ENST00000639295 961 ntBASIC19.95■□□□□ 0.78
NKX2-8O15522 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NKX2-8O15522 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms