Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.75■■□□□ 1.55
ATP2A1O14983 AP004607.7-201ENST00000527152 1677 ntBASIC24.75■■□□□ 1.55
ATP2A1O14983 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ATP2A1O14983 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
ATP2A1O14983 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ATP2A1O14983 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.74■■□□□ 1.55
ATP2A1O14983 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.74■■□□□ 1.55
ATP2A1O14983 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.74■■□□□ 1.55
ATP2A1O14983 AP001160.3-201ENST00000601484 763 ntBASIC24.74■■□□□ 1.55
ATP2A1O14983 OR7E47P-201ENST00000546390 1422 ntBASIC24.74■■□□□ 1.55
ATP2A1O14983 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.74■■□□□ 1.55
ATP2A1O14983 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.74■■□□□ 1.55
ATP2A1O14983 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ATP2A1O14983 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.74■■□□□ 1.55
ATP2A1O14983 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ATP2A1O14983 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
ATP2A1O14983 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.73■■□□□ 1.55
ATP2A1O14983 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ATP2A1O14983 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ATP2A1O14983 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.73■■□□□ 1.55
ATP2A1O14983 AC006970.2-201ENST00000450065 779 ntBASIC24.73■■□□□ 1.55
ATP2A1O14983 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.73■■□□□ 1.55
ATP2A1O14983 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ATP2A1O14983 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.73■■□□□ 1.55
ATP2A1O14983 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.73■■□□□ 1.55
ATP2A1O14983 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.73■■□□□ 1.55
ATP2A1O14983 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ATP2A1O14983 AC104771.1-201ENST00000603335 964 ntBASIC24.73■■□□□ 1.55
ATP2A1O14983 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP2A1O14983 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC24.72■■□□□ 1.55
ATP2A1O14983 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP2A1O14983 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP2A1O14983 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
ATP2A1O14983 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.72■■□□□ 1.55
ATP2A1O14983 AL034346.1-201ENST00000568244 1277 ntBASIC24.72■■□□□ 1.55
ATP2A1O14983 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP2A1O14983 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.72■■□□□ 1.55
ATP2A1O14983 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP2A1O14983 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ATP2A1O14983 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ATP2A1O14983 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC24.72■■□□□ 1.55
ATP2A1O14983 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.71■■□□□ 1.55
ATP2A1O14983 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.71■■□□□ 1.55
ATP2A1O14983 UBE2DNL-204ENST00000602536 740 ntBASIC24.71■■□□□ 1.55
ATP2A1O14983 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
ATP2A1O14983 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
ATP2A1O14983 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
ATP2A1O14983 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ATP2A1O14983 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP2A1O14983 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.7■■□□□ 1.54
ATP2A1O14983 DUX4L16-201ENST00000555130 1264 ntBASIC24.7■■□□□ 1.54
ATP2A1O14983 AC138907.5-202ENST00000569484 235 ntBASIC24.7■■□□□ 1.54
ATP2A1O14983 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC24.7■■□□□ 1.54
ATP2A1O14983 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP2A1O14983 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ATP2A1O14983 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP2A1O14983 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
ATP2A1O14983 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ATP2A1O14983 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
ATP2A1O14983 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.69■■□□□ 1.54
ATP2A1O14983 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP2A1O14983 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.69■■□□□ 1.54
ATP2A1O14983 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.69■■□□□ 1.54
ATP2A1O14983 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC24.69■■□□□ 1.54
ATP2A1O14983 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.69■■□□□ 1.54
ATP2A1O14983 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.69■■□□□ 1.54
ATP2A1O14983 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.69■■□□□ 1.54
ATP2A1O14983 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
ATP2A1O14983 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2A1O14983 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2A1O14983 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.68■■□□□ 1.54
ATP2A1O14983 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.68■■□□□ 1.54
ATP2A1O14983 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2A1O14983 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
ATP2A1O14983 MIR663A-201ENST00000385250 93 ntBASIC24.68■■□□□ 1.54
ATP2A1O14983 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.68■■□□□ 1.54
ATP2A1O14983 AC010141.2-201ENST00000452426 721 ntBASIC24.68■■□□□ 1.54
ATP2A1O14983 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.68■■□□□ 1.54
ATP2A1O14983 KRT18P20-201ENST00000548986 1279 ntBASIC24.68■■□□□ 1.54
ATP2A1O14983 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.68■■□□□ 1.54
ATP2A1O14983 AC231657.2-201ENST00000624556 255 ntBASIC24.68■■□□□ 1.54
ATP2A1O14983 MYCNOS-205ENST00000641950 531 ntBASIC24.68■■□□□ 1.54
ATP2A1O14983 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2A1O14983 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2A1O14983 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2A1O14983 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
ATP2A1O14983 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.68■■□□□ 1.54
ATP2A1O14983 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2A1O14983 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms