Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AC027612.3-201ENST00000413684 1047 ntBASIC20.28■□□□□ 0.84
CLDN4O14493 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 MIR6084-201ENST00000622012 110 ntBASIC20.28■□□□□ 0.84
CLDN4O14493 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.28■□□□□ 0.84
CLDN4O14493 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 GUSBP5-202ENST00000510805 1989 ntBASIC20.28■□□□□ 0.84
CLDN4O14493 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLDN4O14493 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN4O14493 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN4O14493 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN4O14493 AC133561.1-201ENST00000568600 2415 ntBASIC20.27■□□□□ 0.84
CLDN4O14493 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
CLDN4O14493 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN4O14493 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.27■□□□□ 0.84
CLDN4O14493 AP004607.7-201ENST00000527152 1677 ntBASIC20.27■□□□□ 0.84
CLDN4O14493 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.27■□□□□ 0.84
CLDN4O14493 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN4O14493 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLDN4O14493 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
CLDN4O14493 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN4O14493 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLDN4O14493 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN4O14493 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CLDN4O14493 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLDN4O14493 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.27■□□□□ 0.83
CLDN4O14493 AC009237.3-201ENST00000393279 1427 ntBASIC20.27■□□□□ 0.83
CLDN4O14493 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CLDN4O14493 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN4O14493 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN4O14493 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CLDN4O14493 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLDN4O14493 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.26■□□□□ 0.83
CLDN4O14493 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.26■□□□□ 0.83
CLDN4O14493 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.26■□□□□ 0.83
CLDN4O14493 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN4O14493 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.26■□□□□ 0.83
CLDN4O14493 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN4O14493 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.26■□□□□ 0.83
CLDN4O14493 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN4O14493 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN4O14493 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN4O14493 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLDN4O14493 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLDN4O14493 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN4O14493 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN4O14493 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN4O14493 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN4O14493 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLDN4O14493 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN4O14493 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN4O14493 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN4O14493 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN4O14493 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLDN4O14493 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.25■□□□□ 0.83
CLDN4O14493 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
CLDN4O14493 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CLDN4O14493 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN4O14493 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLDN4O14493 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN4O14493 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN4O14493 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
CLDN4O14493 AC123595.1-201ENST00000440769 1046 ntBASIC20.24■□□□□ 0.83
CLDN4O14493 YBX1P1-201ENST00000445822 960 ntBASIC20.24■□□□□ 0.83
CLDN4O14493 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CLDN4O14493 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CLDN4O14493 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.24■□□□□ 0.83
CLDN4O14493 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN4O14493 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLDN4O14493 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN4O14493 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
CLDN4O14493 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN4O14493 LINC02228-203ENST00000641970 1355 ntBASIC20.23■□□□□ 0.83
CLDN4O14493 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CLDN4O14493 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLDN4O14493 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.23■□□□□ 0.83
CLDN4O14493 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.23■□□□□ 0.83
CLDN4O14493 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN4O14493 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLDN4O14493 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
CLDN4O14493 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
CLDN4O14493 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLDN4O14493 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
CLDN4O14493 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.22■□□□□ 0.83
CLDN4O14493 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms