Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 OXCT2P1-201ENST00000447263 1535 ntBASIC23.32■■□□□ 1.32
SOX1O00570 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SOX1O00570 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
SOX1O00570 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SOX1O00570 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.32■■□□□ 1.32
SOX1O00570 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.31■■□□□ 1.32
SOX1O00570 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SOX1O00570 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.31■■□□□ 1.32
SOX1O00570 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SOX1O00570 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.31■■□□□ 1.32
SOX1O00570 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.31■■□□□ 1.32
SOX1O00570 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
SOX1O00570 AC009237.3-201ENST00000393279 1427 ntBASIC23.31■■□□□ 1.32
SOX1O00570 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SOX1O00570 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SOX1O00570 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.31■■□□□ 1.32
SOX1O00570 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.3■■□□□ 1.32
SOX1O00570 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.3■■□□□ 1.32
SOX1O00570 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SOX1O00570 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.3■■□□□ 1.32
SOX1O00570 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.3■■□□□ 1.32
SOX1O00570 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.3■■□□□ 1.32
SOX1O00570 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SOX1O00570 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX1O00570 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX1O00570 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX1O00570 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.29■■□□□ 1.32
SOX1O00570 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX1O00570 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX1O00570 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.29■■□□□ 1.32
SOX1O00570 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.29■■□□□ 1.32
SOX1O00570 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.29■■□□□ 1.32
SOX1O00570 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.29■■□□□ 1.32
SOX1O00570 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SOX1O00570 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.29■■□□□ 1.32
SOX1O00570 C2orf69P4-201ENST00000565394 541 ntBASIC23.29■■□□□ 1.32
SOX1O00570 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX1O00570 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.29■■□□□ 1.32
SOX1O00570 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.29■■□□□ 1.32
SOX1O00570 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOX1O00570 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SOX1O00570 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.28■■□□□ 1.32
SOX1O00570 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX1O00570 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.28■■□□□ 1.32
SOX1O00570 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SOX1O00570 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
SOX1O00570 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.28■■□□□ 1.32
SOX1O00570 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.28■■□□□ 1.32
SOX1O00570 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
SOX1O00570 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOX1O00570 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.28■■□□□ 1.32
SOX1O00570 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.28■■□□□ 1.32
SOX1O00570 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 AC004687.1-201ENST00000579003 1625 ntBASIC23.27■■□□□ 1.32
SOX1O00570 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SOX1O00570 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SOX1O00570 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.27■■□□□ 1.32
SOX1O00570 AC138907.5-202ENST00000569484 235 ntBASIC23.27■■□□□ 1.32
SOX1O00570 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.27■■□□□ 1.32
SOX1O00570 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SOX1O00570 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.26■■□□□ 1.31
SOX1O00570 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SOX1O00570 AC087499.1-201ENST00000418141 1075 ntBASIC23.26■■□□□ 1.31
SOX1O00570 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.26■■□□□ 1.31
SOX1O00570 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.26■■□□□ 1.31
SOX1O00570 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.26■■□□□ 1.31
SOX1O00570 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.26■■□□□ 1.31
SOX1O00570 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.26■■□□□ 1.31
SOX1O00570 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.26■■□□□ 1.31
SOX1O00570 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.26■■□□□ 1.31
SOX1O00570 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOX1O00570 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOX1O00570 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SOX1O00570 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOX1O00570 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.25■■□□□ 1.31
SOX1O00570 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SOX1O00570 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SOX1O00570 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
SOX1O00570 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SOX1O00570 TSPY7P-201ENST00000431358 1114 ntBASIC23.24■■□□□ 1.31
SOX1O00570 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SOX1O00570 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.24■■□□□ 1.31
SOX1O00570 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC23.24■■□□□ 1.31
SOX1O00570 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
SOX1O00570 AC012306.2-201ENST00000609350 630 ntBASIC23.24■■□□□ 1.31
SOX1O00570 AC097493.4-201ENST00000641197 219 ntBASIC23.24■■□□□ 1.31
SOX1O00570 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SOX1O00570 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.23■■□□□ 1.31
SOX1O00570 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX1O00570 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX1O00570 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.23■■□□□ 1.31
SOX1O00570 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SOX1O00570 TMPOP1-202ENST00000424642 1267 ntBASIC23.23■■□□□ 1.31
SOX1O00570 TSPY15P-201ENST00000457163 923 ntBASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms