Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXE1O00358 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXE1O00358 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXE1O00358 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXE1O00358 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXE1O00358 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXE1O00358 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
FOXE1O00358 AC126544.1-201ENST00000580842 1059 ntBASIC20.6■□□□□ 0.89
FOXE1O00358 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXE1O00358 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXE1O00358 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXE1O00358 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXE1O00358 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
FOXE1O00358 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 IGHV3-19-201ENST00000521488 291 ntBASIC20.59■□□□□ 0.89
FOXE1O00358 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.59■□□□□ 0.89
FOXE1O00358 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.59■□□□□ 0.89
FOXE1O00358 AC027682.1-201ENST00000562846 899 ntBASIC20.59■□□□□ 0.89
FOXE1O00358 AC110285.6-201ENST00000617652 491 ntBASIC20.59■□□□□ 0.89
FOXE1O00358 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXE1O00358 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXE1O00358 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXE1O00358 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FOXE1O00358 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
FOXE1O00358 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXE1O00358 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXE1O00358 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXE1O00358 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXE1O00358 AC008764.7-201ENST00000593779 1081 ntBASIC20.58■□□□□ 0.89
FOXE1O00358 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.58■□□□□ 0.89
FOXE1O00358 AL355001.2-201ENST00000620617 1191 ntBASIC20.58■□□□□ 0.89
FOXE1O00358 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXE1O00358 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXE1O00358 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXE1O00358 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXE1O00358 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXE1O00358 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
FOXE1O00358 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXE1O00358 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXE1O00358 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
FOXE1O00358 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXE1O00358 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXE1O00358 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXE1O00358 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXE1O00358 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.57■□□□□ 0.88
FOXE1O00358 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXE1O00358 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXE1O00358 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXE1O00358 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXE1O00358 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
FOXE1O00358 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FOXE1O00358 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXE1O00358 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
FOXE1O00358 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FOXE1O00358 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXE1O00358 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXE1O00358 AC099791.1-201ENST00000416440 715 ntBASIC20.56■□□□□ 0.88
FOXE1O00358 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.56■□□□□ 0.88
FOXE1O00358 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXE1O00358 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXE1O00358 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXE1O00358 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
FOXE1O00358 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXE1O00358 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXE1O00358 AP004607.7-201ENST00000527152 1677 ntBASIC20.55■□□□□ 0.88
FOXE1O00358 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXE1O00358 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
FOXE1O00358 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.55■□□□□ 0.88
FOXE1O00358 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXE1O00358 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXE1O00358 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXE1O00358 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXE1O00358 AP001330.3-201ENST00000520123 633 ntBASIC20.55■□□□□ 0.88
FOXE1O00358 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.55■□□□□ 0.88
FOXE1O00358 SMUG1P1-201ENST00000590640 811 ntBASIC20.55■□□□□ 0.88
FOXE1O00358 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXE1O00358 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXE1O00358 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXE1O00358 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXE1O00358 AC244015.2-201ENST00000616358 1861 ntBASIC20.54■□□□□ 0.88
FOXE1O00358 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXE1O00358 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXE1O00358 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.54■□□□□ 0.88
FOXE1O00358 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXE1O00358 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms