Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.44■□□□□ 0.86
UPK1AO00322 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.44■□□□□ 0.86
UPK1AO00322 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UPK1AO00322 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UPK1AO00322 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.43■□□□□ 0.86
UPK1AO00322 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1AO00322 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1AO00322 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1AO00322 OR2I1P-207ENST00000453522 948 ntBASIC20.43■□□□□ 0.86
UPK1AO00322 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1AO00322 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UPK1AO00322 AC011298.3-201ENST00000615796 283 ntBASIC20.43■□□□□ 0.86
UPK1AO00322 AL031602.1-201ENST00000633169 911 ntBASIC20.43■□□□□ 0.86
UPK1AO00322 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.43■□□□□ 0.86
UPK1AO00322 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.43■□□□□ 0.86
UPK1AO00322 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UPK1AO00322 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.43■□□□□ 0.86
UPK1AO00322 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
UPK1AO00322 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.42■□□□□ 0.86
UPK1AO00322 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.42■□□□□ 0.86
UPK1AO00322 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.42■□□□□ 0.86
UPK1AO00322 AC136469.2-201ENST00000623944 1028 ntBASIC20.42■□□□□ 0.86
UPK1AO00322 AC008406.3-201ENST00000620001 1374 ntBASIC20.42■□□□□ 0.86
UPK1AO00322 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UPK1AO00322 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
UPK1AO00322 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1AO00322 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
UPK1AO00322 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1AO00322 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1AO00322 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1AO00322 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
UPK1AO00322 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK1AO00322 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK1AO00322 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1AO00322 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK1AO00322 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1AO00322 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
UPK1AO00322 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.41■□□□□ 0.86
UPK1AO00322 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
UPK1AO00322 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1AO00322 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1AO00322 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1AO00322 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1AO00322 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1AO00322 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.4■□□□□ 0.86
UPK1AO00322 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1AO00322 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.4■□□□□ 0.86
UPK1AO00322 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
UPK1AO00322 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPK1AO00322 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPK1AO00322 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UPK1AO00322 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.39■□□□□ 0.85
UPK1AO00322 UNC93B3-201ENST00000308076 687 ntBASIC20.39■□□□□ 0.85
UPK1AO00322 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UPK1AO00322 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.39■□□□□ 0.85
UPK1AO00322 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
UPK1AO00322 AC010525.1-201ENST00000585559 441 ntBASIC20.39■□□□□ 0.85
UPK1AO00322 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
UPK1AO00322 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
UPK1AO00322 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.39■□□□□ 0.85
UPK1AO00322 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
UPK1AO00322 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPK1AO00322 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.39■□□□□ 0.85
UPK1AO00322 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
UPK1AO00322 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.38■□□□□ 0.85
UPK1AO00322 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
UPK1AO00322 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
UPK1AO00322 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.38■□□□□ 0.85
UPK1AO00322 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.38■□□□□ 0.85
UPK1AO00322 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.38■□□□□ 0.85
UPK1AO00322 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPK1AO00322 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.38■□□□□ 0.85
UPK1AO00322 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms