Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC01548A6NM66 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC01548A6NM66 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
LINC01548A6NM66 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
LINC01548A6NM66 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC01548A6NM66 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.02■□□□□ 0.32
LINC01548A6NM66 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC01548A6NM66 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.02■□□□□ 0.31
LINC01548A6NM66 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01548A6NM66 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01548A6NM66 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01548A6NM66 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LINC01548A6NM66 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 AC123595.1-201ENST00000440769 1046 ntBASIC17.01■□□□□ 0.31
LINC01548A6NM66 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 TPRG1LP1-201ENST00000598702 760 ntBASIC17.01■□□□□ 0.31
LINC01548A6NM66 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LINC01548A6NM66 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.01■□□□□ 0.31
LINC01548A6NM66 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 AC012676.1-201ENST00000574705 1949 ntBASIC17■□□□□ 0.31
LINC01548A6NM66 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17■□□□□ 0.31
LINC01548A6NM66 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17■□□□□ 0.31
LINC01548A6NM66 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17■□□□□ 0.31
LINC01548A6NM66 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 CCDC92B-201ENST00000575506 885 ntBASIC17■□□□□ 0.31
LINC01548A6NM66 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17■□□□□ 0.31
LINC01548A6NM66 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LINC01548A6NM66 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LINC01548A6NM66 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 LINC02228-203ENST00000641970 1355 ntBASIC16.99■□□□□ 0.31
LINC01548A6NM66 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LINC01548A6NM66 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LINC01548A6NM66 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01548A6NM66 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01548A6NM66 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01548A6NM66 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01548A6NM66 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01548A6NM66 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LINC01548A6NM66 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 DUX4L2-201ENST00000561772 1275 ntBASIC16.98■□□□□ 0.31
LINC01548A6NM66 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
LINC01548A6NM66 DUX4L6-201ENST00000626483 1275 ntBASIC16.98■□□□□ 0.31
LINC01548A6NM66 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms