Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD3L3A6NE82 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3L3A6NE82 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 AP001160.3-201ENST00000601484 763 ntBASIC19.03■□□□□ 0.64
MBD3L3A6NE82 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 AP006587.3-201ENST00000525742 1516 ntBASIC19.03■□□□□ 0.64
MBD3L3A6NE82 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3L3A6NE82 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 AC138907.5-202ENST00000569484 235 ntBASIC19.02■□□□□ 0.64
MBD3L3A6NE82 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 MFSD11-216ENST00000590393 1141 ntBASIC19.02■□□□□ 0.64
MBD3L3A6NE82 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3L3A6NE82 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
MBD3L3A6NE82 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MBD3L3A6NE82 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MBD3L3A6NE82 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3L3A6NE82 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19■□□□□ 0.63
MBD3L3A6NE82 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
MBD3L3A6NE82 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 HLA-L-209ENST00000420110 1011 ntBASIC19■□□□□ 0.63
MBD3L3A6NE82 AC010141.2-201ENST00000452426 721 ntBASIC19■□□□□ 0.63
MBD3L3A6NE82 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19■□□□□ 0.63
MBD3L3A6NE82 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19■□□□□ 0.63
MBD3L3A6NE82 UBE2DNL-204ENST00000602536 740 ntBASIC19■□□□□ 0.63
MBD3L3A6NE82 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19■□□□□ 0.63
MBD3L3A6NE82 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3L3A6NE82 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.99■□□□□ 0.63
MBD3L3A6NE82 KRT18P20-201ENST00000548986 1279 ntBASIC18.99■□□□□ 0.63
MBD3L3A6NE82 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
MBD3L3A6NE82 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 CROCCP5-201ENST00000436658 830 ntBASIC18.98■□□□□ 0.63
MBD3L3A6NE82 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 AC006970.2-201ENST00000450065 779 ntBASIC18.98■□□□□ 0.63
MBD3L3A6NE82 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 EEF1DP3-203ENST00000566025 782 ntBASIC18.98■□□□□ 0.63
MBD3L3A6NE82 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 MYCNOS-205ENST00000641950 531 ntBASIC18.98■□□□□ 0.63
MBD3L3A6NE82 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD3L3A6NE82 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms