Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-1A0A0K0K1D8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NTF6A-201ENST00000591175 560 ntBASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 ATP5G2P3-201ENST00000429083 425 ntBASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 OR7E47P-201ENST00000546390 1422 ntBASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-1A0A0K0K1D8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 FEM1AP1-201ENST00000431297 1995 ntBASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AL049796.1-201ENST00000565336 1766 ntBASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 AC026471.6-201ENST00000622954 1905 ntBASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-1A0A0K0K1D8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-1A0A0K0K1D8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC004987.1-201ENST00000428627 508 ntBASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-1A0A0K0K1D8 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 HSD17B1P1-201ENST00000590052 955 ntBASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AC021242.3-201ENST00000607598 1377 ntBASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-1A0A0K0K1D8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-1A0A0K0K1D8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms