Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 AC010997.5-201ENST00000609182 354 ntBASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 PKD1P6-201ENST00000343738 4769 ntBASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 OR7E47P-201ENST00000546390 1422 ntBASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRBV5-5A0A0J9YX44 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 MIR4787-201ENST00000607364 84 ntBASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-5A0A0J9YX44 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 AL451085.2-201ENST00000605085 799 ntBASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-5A0A0J9YX44 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC241377.3-202ENST00000626088 1088 ntBASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC241585.3-202ENST00000628937 1088 ntBASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC245100.8-202ENST00000629247 1058 ntBASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC133637.1-201ENST00000624115 1537 ntBASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV5-5A0A0J9YX44 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
TRBV5-5A0A0J9YX44 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 LINC01521-201ENST00000504184 1943 ntBASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 AL117332.1-201ENST00000622628 974 ntBASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.66■□□□□ 0.58
TRBV5-5A0A0J9YX44 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRBV5-5A0A0J9YX44 AL157384.1-201ENST00000445995 2473 ntBASIC18.65■□□□□ 0.58
TRBV5-5A0A0J9YX44 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms