Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 AC006455.2-201ENST00000429931 906 ntBASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 UNC93B8-201ENST00000511903 705 ntBASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 AC241377.3-202ENST00000626088 1088 ntBASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 AC241585.3-202ENST00000628937 1088 ntBASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 AC245100.8-202ENST00000629247 1058 ntBASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV4-1A0A0J9YWV2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 MIR6724-1-201ENST00000616420 92 ntBASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 MIR6724-2-201ENST00000616483 92 ntBASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 MIR6724-4-201ENST00000617390 92 ntBASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 MIR6724-3-201ENST00000622482 92 ntBASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.74■□□□□ 0.75
TRBV4-1A0A0J9YWV2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 pRNA.6-201ENST00000610482 90 ntBASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 pRNA.5-201ENST00000612139 90 ntBASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 pRNA.11-201ENST00000618423 90 ntBASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 pRNA.13-201ENST00000619112 90 ntBASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRBV4-1A0A0J9YWV2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV4-1A0A0J9YWV2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TRBV4-1A0A0J9YWV2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 OR7E47P-201ENST00000546390 1422 ntBASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBV4-1A0A0J9YWV2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV4-1A0A0J9YWV2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms