Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV12-3A0A0B4J271 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 TRIR-202ENST00000588213 841 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 AC007375.3-201ENST00000600936 2314 ntBASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-3A0A0B4J271 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 QDPR-206ENST00000508623 601 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-3A0A0B4J271 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 AL512631.2-201ENST00000604634 923 ntBASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-3A0A0B4J271 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.14
TRAV12-3A0A0B4J271 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.96■□□□□ 0.14
TRAV12-3A0A0B4J271 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV12-3A0A0B4J271 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV12-3A0A0B4J271 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-3A0A0B4J271 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 AL031602.1-201ENST00000633169 911 ntBASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-3A0A0B4J271 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms