Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 AL117328.2-201ENST00000624617 1940 ntBASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV2A0A0B4J234 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 AC005837.3-201ENST00000612163 286 ntBASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV2A0A0B4J234 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 MIR638-201ENST00000385237 100 ntBASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV2A0A0B4J234 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV2A0A0B4J234 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 MIR572-201ENST00000384983 95 ntBASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 AC092053.2-201ENST00000640557 1818 ntBASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV2A0A0B4J234 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
TRAV2A0A0B4J234 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV2A0A0B4J234 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.21■□□□□ 0.18
TRAV2A0A0B4J234 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 TSPY26P-201ENST00000476365 1326 ntBASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 LINC00526-201ENST00000581067 1875 ntBASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV2A0A0B4J234 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms