Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV8-1A0A0A6YYK1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-1A0A0A6YYK1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV8-1A0A0A6YYK1 FEM1AP4-201ENST00000443167 1987 ntBASIC16.33■□□□□ 0.21
TRAV8-1A0A0A6YYK1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV8-1A0A0A6YYK1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AC009102.2-201ENST00000606772 1639 ntBASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV8-1A0A0A6YYK1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 AL031848.2-201ENST00000607670 837 ntBASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV8-1A0A0A6YYK1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRAV8-1A0A0A6YYK1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms