Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC02256-202ENST00000564670 543 ntTSL 4 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 HP-216ENST00000570083 1270 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC007638.1-201ENST00000576751 1763 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC135983.5-201ENST00000604574 144 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC026801.3-201ENST00000606401 1565 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 MEG8_2.1-201ENST00000610604 122 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 PDPN-211ENST00000617617 2808 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC127002.1-201ENST00000619123 455 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 IL19-204ENST00000620365 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC145098.2-201ENST00000623593 3026 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 PALM2-202ENST00000374531 4492 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 AC073578.3-201ENST00000624926 4191 ntBASIC12.75□□□□□ -0.37
LMO3Q8TAP4 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 GOLM1-202ENST00000388711 3022 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 SSRP1-201ENST00000278412 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LMO3Q8TAP4 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 ABL2-211ENST00000512653 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 NF1P6-201ENST00000426025 1649 ntBASIC12.74□□□□□ -0.37
LMO3Q8TAP4 ZKSCAN3-203ENST00000377255 4799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 MPP3-202ENST00000398393 2996 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 C3orf20-203ENST00000435614 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 NTM-201ENST00000374784 1315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 KLC4-215ENST00000479388 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 LINC02106-202ENST00000513880 225 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 MIOXP1-201ENST00000521205 835 ntBASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 MORF4L1-208ENST00000558746 874 ntTSL 3 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 BX510359.7-201ENST00000619819 630 ntBASIC12.74□□□□□ -0.37
LMO3Q8TAP4 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 FP236383.2-201ENST00000625598 923 ntBASIC12.74□□□□□ -0.37
LMO3Q8TAP4 FP236383.3-201ENST00000627981 923 ntBASIC12.74□□□□□ -0.37
LMO3Q8TAP4 FP671120.3-201ENST00000631211 923 ntBASIC12.74□□□□□ -0.37
LMO3Q8TAP4 OSBPL9-213ENST00000486942 2529 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 CWH43-204ENST00000513409 2390 ntTSL 2 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 CDC37L1-201ENST00000381854 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 FITM2-201ENST00000396825 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 ZNF18-202ENST00000454073 2261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PCDHGA7-202ENST00000617050 3262 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 INSC-201ENST00000379554 2954 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 ZNF839-206ENST00000558850 2971 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 MON2-212ENST00000552115 3760 ntTSL 5 BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 FCRL5-203ENST00000368190 2800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 CD99L2-203ENST00000370377 3604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 MPP2-203ENST00000461854 3462 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PRAMEF6-201ENST00000376189 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PRAMEF6-202ENST00000415464 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 PRAMEF5-201ENST00000622421 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LMO3Q8TAP4 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 TTN-AS1-204ENST00000431259 1472 ntTSL 5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 OTUD6B-AS1-202ENST00000524003 2171 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 NNT-202ENST00000344920 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 PAMR1-209ENST00000622144 2785 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 ODF2-206ENST00000393533 2086 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 KLK2-203ENST00000391810 2674 ntTSL 2 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 PCNA-201ENST00000379143 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 RAP1GAP2-203ENST00000540393 3218 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 OR13C9-201ENST00000259362 957 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 SERHL2-202ENST00000335879 753 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 SPTLC1-202ENST00000337841 946 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
LMO3Q8TAP4 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms