Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 FMO6P-202ENST00000367754 2130 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 LINC00339-201ENST00000404210 1189 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC011005.1-201ENST00000467614 1263 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 RN7SL487P-201ENST00000468140 344 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 JPT1-208ENST00000481647 576 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC245884.7-201ENST00000514037 356 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 RBPMS-205ENST00000517860 1076 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC022733.2-201ENST00000520487 531 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 MRNIP-216ENST00000521333 410 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 HNRNPA1P50-201ENST00000546565 928 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 WSB1-213ENST00000583193 552 ntTSL 4 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC004134.1-201ENST00000587835 225 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC244102.2-201ENST00000597568 955 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC013403.2-201ENST00000607659 480 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 CYP17A1-205ENST00000638272 1227 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC092329.4-208ENST00000640354 562 ntTSL 4 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 LINC00339-213ENST00000642137 222 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 CACNA1C-203ENST00000344100 6634 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 MYO10-212ENST00000515803 4839 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 CNKSR2-201ENST00000279451 4478 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 PLEKHA6-205ENST00000637508 5704 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 BAHCC1-206ENST00000584436 10801 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 DOCK8-201ENST00000382329 6124 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 CD160-201ENST00000235933 1425 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 GLDN-210ENST00000612989 1676 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 AC092159.2-201ENST00000445418 1943 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 EFHC1-219ENST00000636379 1829 ntTSL 5 BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 NSD3-203ENST00000433384 5276 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 OR2A9P-202ENST00000479102 1990 ntBASIC11.07□□□□□ -0.64
NPIPA3F8WFD2 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 RAP1GAP2-202ENST00000366401 6616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 ZNF548-201ENST00000336128 2115 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 ARHGAP21-203ENST00000396432 7167 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 KIR3DL2-202ENST00000326321 1877 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 TAS1R1-202ENST00000351136 1871 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 DPY19L2-202ENST00000324472 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 EEF2KMT-202ENST00000458008 2268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 FP325332.1-201ENST00000624818 2045 ntBASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 FAM107A-204ENST00000464064 2159 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 C8orf86-202ENST00000437935 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SPOP-205ENST00000503676 1932 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 RN7SKP170-201ENST00000362550 328 ntBASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 TRAF3IP2-206ENST00000368735 903 ntTSL 2 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 SRSF9P1-201ENST00000399149 530 ntBASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 LINC01135-201ENST00000419531 996 ntTSL 4 BASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 HNRNPA1P59-201ENST00000430583 918 ntBASIC11.06□□□□□ -0.64
NPIPA3F8WFD2 AC096919.1-201ENST00000472730 652 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms