Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 FAM223A-202ENST00000625204 713 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 RN7SK-201ENST00000636484 328 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AC127526.5-201ENST00000637148 1110 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 BTNL2-201ENST00000374993 1368 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 NPSR1-209ENST00000531252 1377 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 BEND3P2-201ENST00000414425 2254 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 AL357054.4-201ENST00000606285 2814 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 CICP7-201ENST00000432723 2477 ntBASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 PAX6-249ENST00000639034 1597 ntTSL 5 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 WWP2-201ENST00000356003 4227 ntTSL 2 BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NPIPA3F8WFD2 ATL2-206ENST00000419554 2335 ntTSL 2 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 DIO1-202ENST00000361921 1861 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 CSF2RA-208ENST00000417535 1955 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 ZER1-201ENST00000291900 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 SCML4-204ENST00000369025 1534 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 KIF18BP1-201ENST00000567585 2264 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 SPTLC1P3-201ENST00000403408 259 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AC096677.3-201ENST00000413162 387 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AL354714.2-201ENST00000425270 1097 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AC010280.2-201ENST00000507733 410 ntTSL 2 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AP000812.3-201ENST00000544535 609 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 HNRNPA1P62-201ENST00000559372 952 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 C17orf62-206ENST00000577436 1079 ntTSL 3 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AC012486.1-201ENST00000625143 216 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AC011591.2-201ENST00000636637 786 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 FAM90A27P-201ENST00000593323 1370 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 FAM90A28P-202ENST00000597191 1374 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AL009178.1-201ENST00000392115 1486 ntBASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 CCDC175-202ENST00000537690 2616 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 CHRNA2-202ENST00000407991 4067 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 MTHFD2-202ENST00000409601 1865 ntTSL 5 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NPIPA3F8WFD2 AC069061.4-201ENST00000581294 1347 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 ARHGEF26-201ENST00000356448 5254 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 NF2-204ENST00000361166 1837 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 LINC01898-201ENST00000564156 1903 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AL359510.2-201ENST00000624958 2249 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 TIAM2-203ENST00000360366 5771 ntTSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC068234.1-201ENST00000560629 2785 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 KRT31-201ENST00000251645 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 SYNE1-204ENST00000367248 7165 ntTSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 SMIM4-201ENST00000307106 274 ntTSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 RN7SKP245-201ENST00000364025 320 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 TAC4-204ENST00000398154 624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC026202.1-201ENST00000443087 585 ntTSL 4 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 COQ5-202ENST00000445328 992 ntTSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 PARVG-208ENST00000466375 820 ntTSL 2 BASIC11.09□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms