Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC008694.1-201ENST00000522076 428 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AKR1B1P3-201ENST00000525311 588 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 ENO1P2-201ENST00000557166 974 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AC027373.1-201ENST00000564694 1142 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AC010615.2-201ENST00000596705 566 ntTSL 4 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AC022001.3-201ENST00000606330 596 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 PTCHD1-AS-202ENST00000608254 557 ntTSL 4 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 BX510359.6-201ENST00000615765 343 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AL627230.4-201ENST00000617851 370 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 PCGF2-205ENST00000618506 1196 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AC027281.2-201ENST00000623856 713 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AC011591.2-201ENST00000636637 786 ntBASIC12.85□□□□□ -0.35
LMO3Q8TAP4 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 TMEM139-204ENST00000409541 1907 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 AL512770.1-202ENST00000421657 1914 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 CCDC144CP-201ENST00000340196 2823 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 NCAM1-210ENST00000529356 1843 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 LARP4-206ENST00000518444 2853 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 NFIA-202ENST00000371184 1348 ntTSL 5 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 FER1L6-AS2-201ENST00000520031 1746 ntTSL 2 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
LMO3Q8TAP4 FYN-201ENST00000229471 2009 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 CYP4F3-206ENST00000591058 2983 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 TCP1P1-201ENST00000412860 1610 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 ZNF610-201ENST00000321287 2150 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 RIBC1-204ENST00000457095 1949 ntTSL 2 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 GTF2H2-202ENST00000330280 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 HIST1H2BG-201ENST00000541790 1534 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 MASTL-202ENST00000375940 3080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 EPHB6-201ENST00000411471 3367 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC246680.1-201ENST00000444624 494 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 GPAT2P2-201ENST00000445404 863 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 HMGB1P8-201ENST00000558211 949 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 MIR4296-201ENST00000581038 88 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC091691.1-201ENST00000583587 1018 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 RN7SL202P-201ENST00000584410 262 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AP003392.6-201ENST00000607709 325 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC134878.2-201ENST00000620700 1265 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 AC148476.1-201ENST00000622182 705 ntBASIC12.84□□□□□ -0.35
LMO3Q8TAP4 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 THAP5-201ENST00000313516 1568 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 PWP1-201ENST00000412830 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 ZNF2-203ENST00000614034 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 NCAM1-230ENST00000621850 2787 ntTSL 5 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 ITIH5-209ENST00000613909 2916 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 ELOVL1-202ENST00000413844 1451 ntTSL 2 BASIC12.84□□□□□ -0.35
LMO3Q8TAP4 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 LCTL-202ENST00000537670 2552 ntTSL 2 BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 SMS-202ENST00000404933 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 CLEC4M-208ENST00000596363 1669 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LMO3Q8TAP4 IL17REL-202ENST00000389983 3668 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 PLEKHH1-201ENST00000329153 6604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 HOXA-AS3-202ENST00000518947 3992 ntTSL 2 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 CAV2-202ENST00000343213 776 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 MIR766-201ENST00000390223 111 ntBASIC12.83□□□□□ -0.36
LMO3Q8TAP4 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 TXN2-202ENST00000403313 912 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 AL391903.1-201ENST00000407513 365 ntBASIC12.83□□□□□ -0.36
LMO3Q8TAP4 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 AL109936.1-201ENST00000442089 460 ntBASIC12.83□□□□□ -0.36
LMO3Q8TAP4 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC12.83□□□□□ -0.36
LMO3Q8TAP4 AP000902.1-201ENST00000578806 368 ntBASIC12.83□□□□□ -0.36
LMO3Q8TAP4 AC104996.2-201ENST00000583091 1000 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms