Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DRB4X5D2U9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRB4X5D2U9 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRB4X5D2U9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRB4X5D2U9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DRB4X5D2U9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 AL136162.1-201ENST00000607711 1078 ntBASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 CA15P2-201ENST00000611168 834 ntBASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DRB4X5D2U9 AC242852.2-201ENST00000615738 1807 ntBASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 AC135279.3-201ENST00000610945 1311 ntBASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DRB4X5D2U9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 AC096631.2-201ENST00000436136 790 ntBASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 AC024257.2-201ENST00000549699 147 ntBASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 MIR4767-201ENST00000582827 78 ntBASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 AC087239.1-201ENST00000622671 572 ntBASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DRB4X5D2U9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 AC010525.1-201ENST00000585559 441 ntBASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DRB4X5D2U9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms